PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7EY0

#CDRs = 8; #Clusters = 12.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	94.5	Hu_IGHV3-9*01	100.0	H1	13	H1-13-*	-1	AASGFTFDDYAMH	BBAABBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	94.5	Hu_IGHV3-9*01	80.0	H2	10	H2-10-*	-1	GASWNSGTIG	EBBAABBBBB
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	94.5	Hu_IGHV3-9*01	100.0	H3	13	H3-13-*	-1	AKDFSRDGDAFDI	BBBABAABBBBAB
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	94.5	Hu_IGHV3-9*01	100.0	H4	8	H4-8-1	14	RDNAKNSL	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV3-21*01	90.9	Hu_IGLV3-21*01	81.8	L1	11	L1-11-*	-1	GgnniehkSVH
B	lambda	Homo.sapiens	Hu_IGLV3-21*01	90.9	Hu_IGLV3-21*01	100.0	L2	8	L2-8-*	-1	Yydsdrps
B	lambda	Homo.sapiens	Hu_IGLV3-21*01	90.9	Hu_IGLV3-21*01	77.8	L3	11	L3-11-*	-1	QVWDRSSDQPV	BBBBAAALBBB
B	lambda	Homo.sapiens	Hu_IGLV3-21*01	90.9	Hu_IGLV3-21*01	100.0	L4	6	L4-6-*	-1	NsgntA
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	95.9	Hu_IGHV3-66*01	76.9	H1	13	H1-13-*	-1	AASEFIVSANYMS	BBAABBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	95.9	Hu_IGHV3-66*01	88.9	H2	9	H2-9-1	8	VIYSGGSTF	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	95.9	Hu_IGHV3-66*01	100.0	H3	12	H3-12-*	-1	ARFLPTYDYFDY	BBBBBBBBBBAB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	95.9	Hu_IGHV3-66*01	100.0	H4	8	H4-8-1	9	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	72.7	L1	11	L1-11-*	-1	RTSQSISTYLH	BBABBBAAABB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	87.5	L2	8	L2-8-*	-1	YAASSLHs
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	42.9	L3	10	L3-10-*	-1	QHTDTTplTF	BBBBABBBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	83.3	L4	6	L4-6-1	12	GSGTHF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022