PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7EBZ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Mus.musculus	Mo_IGHV1S78*01	98.3	Mo_IGHV1S78*01	100.0	H1	13	H1-13-1	9	KASGYTFTDYWMH	BBBLBBAAABBBB
E	heavy	Mus.musculus	Mo_IGHV1S78*01	98.3	Mo_IGHV1S78*01	80.0	H2	10	H2-10-*	-1	AIDTSDSYTT	BBBAABABBB
E	heavy	Mus.musculus	Mo_IGHV1S78*01	98.3	Mo_IGHV1S78*01	0.0	H3	12	H3-12-*	-1	ARGGGGNSPFAY	BBBEABLEBLAB
E	heavy	Mus.musculus	Mo_IGHV1S78*01	98.3	Mo_IGHV1S78*01	100.0	H4	8	H4-8-1	14	VDESSSTA	BBAAALBB
F	kappa	Mus.musculus	Mo_IGKV9-120*01	100.0	Mo_IGKV9-120*01	100.0	L1	11	L1-11-1	22	RASQDIGSSLN	BBABBAEABBB
F	kappa	Mus.musculus	Mo_IGKV9-120*01	100.0	Mo_IGKV9-120*01	100.0	L2	8	L2-8-1	26	YATSSLDS	BLLABBBB
F	kappa	Mus.musculus	Mo_IGKV9-120*01	100.0	Mo_IGKV9-120*01	85.7	L3	9	L3-9-cis7-1	16	LQYASFPLT	BBAABBbBB
F	kappa	Mus.musculus	Mo_IGKV9-120*01	100.0	Mo_IGKV9-120*01	100.0	L4	6	L4-6-2	18	RSGSDY	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022