PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7EAM

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Mus.musculus	Mo_IGHV14-1*01	94.5	Mo_IGHV14-1*01	84.6	H1	13	H1-13-1	15	TASGFNIKDTYIH	BBBLBBAAABBBB
C	heavy	Mus.musculus	Mo_IGHV14-1*01	94.5	Mo_IGHV14-1*01	90.0	H2	10	H2-10-1	11	RIDPGDGDTE	BBBAAALBBB
C	heavy	Mus.musculus	Mo_IGHV14-1*01	94.5	Mo_IGHV14-1*01	50.0	H3	13	H3-13-*	-1	TRFYDYVDYGMDY	BBBBAAABABBAB
C	heavy	Mus.musculus	Mo_IGHV14-1*01	94.5	Mo_IGHV14-1*01	100.0	H4	8	H4-8-1	4	ADTSSNTA	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV12-41*01	100.0	Mo_IGKV12-41*01	100.0	L1	11	L1-11-2	5	RASGNIHNYLA	BBABBALLBBB
D	kappa	Mus.musculus	Mo_IGKV12-41*01	100.0	Mo_IGKV12-41*01	100.0	L2	8	L2-8-1	5	YNAKTLAD	BLLABBBB
D	kappa	Mus.musculus	Mo_IGKV12-41*01	100.0	Mo_IGKV12-41*01	100.0	L3	10	L3-10-*	-1	QHFWSTpPWT	BBABEBBbBB
D	kappa	Mus.musculus	Mo_IGKV12-41*01	100.0	Mo_IGKV12-41*01	100.0	L4	6	L4-6-1	8	GSGTQY	EBEABB
H	heavy	Mus.musculus	Mo_IGHV14-1*01	94.5	Mo_IGHV14-1*01	84.6	H1	13	H1-13-1	15	TASGFNIKDTYIH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV14-1*01	94.5	Mo_IGHV14-1*01	90.0	H2	10	H2-10-1	10	RIDPGDGDTE	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV14-1*01	94.5	Mo_IGHV14-1*01	50.0	H3	13	H3-13-*	-1	TRFYDYVDYGMDY	BBBBAAABAEBAB
H	heavy	Mus.musculus	Mo_IGHV14-1*01	94.5	Mo_IGHV14-1*01	100.0	H4	8	H4-8-1	4	ADTSSNTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV12-41*01	100.0	Mo_IGKV12-41*01	100.0	L1	11	L1-11-2	4	RASGNIHNYLA	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV12-41*01	100.0	Mo_IGKV12-41*01	100.0	L2	8	L2-8-1	5	YNAKTLAD	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV12-41*01	100.0	Mo_IGKV12-41*01	100.0	L3	10	L3-10-*	-1	QHFWSTpPWT	BBABEBBbBB
L	kappa	Mus.musculus	Mo_IGKV12-41*01	100.0	Mo_IGKV12-41*01	100.0	L4	6	L4-6-1	7	GSGTQY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022