PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7EAK

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
F	heavy	Mus.musculus	Mo_IGHV1S121*01	86.0	CDRLenMismatch	-1.0	H1	12	H1-12-*	-1	QAFYTFNSYGMQ
F	heavy	Mus.musculus	Mo_IGHV1S121*01	86.0	Mo_IGHV1S121*01	80.0	H2	10	H2-10-1	19	TIYPGNGQTS	BBBAAALBBB
F	heavy	Mus.musculus	Mo_IGHV1S121*01	86.0	Mo_IGHV1S121*01	0.0	H3	10	H3-10-*	-1	AVVPTVDFDY	BBBALABAEB
F	heavy	Mus.musculus	Mo_IGHV1S121*01	86.0	Mo_IGHV1S121*01	87.5	H4	8	H4-8-1	19	ADKSPSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV8-30*01	98.6	Mo_IGKV8-30*01	88.2	L1	17	L1-17-*	-1	KSSQSLlysntqKNYLA	BBABBBBBAAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV8-30*01	98.6	Mo_IGKV8-30*01	100.0	L2	8	L2-8-1	23	YWASTRES	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV8-30*01	98.6	Mo_IGKV8-30*01	100.0	L3	9	L3-9-2	27	QQYYSYPLT	BBAABABBB
L	kappa	Mus.musculus	Mo_IGKV8-30*01	98.6	Mo_IGKV8-30*01	100.0	L4	6	L4-6-1	15	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022