PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7E3K

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Homo.sapiens	Hu_IGHV1-58*01	98.6	Hu_IGHV1-58*01	84.6	H1	13	H1-13-1	19	KASGFTFSGSAVQ	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV1-58*01	98.6	Hu_IGHV1-58*01	100.0	H2	10	H2-10-1	18	WIVVGSGNTN	BBBAAALBBB
D	heavy	Homo.sapiens	Hu_IGHV1-58*01	98.6	Hu_IGHV1-58*01	100.0	H3	16	H3-16-*	-1	AAPYcsSTSCRDGFDI
D	heavy	Homo.sapiens	Hu_IGHV1-58*01	98.6	Hu_IGHV1-58*01	100.0	H4	8	H4-8-1	8	RDMSTSTA	BBAAALBB
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	91.7	L1	12	L1-12-1	17	RASQSVRsSYLA	BBABBBBAAABB
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	20	YGASSRAT	BLLABBBB
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	85.7	L3	9	L3-9-*	-1	QQYGRSPWT	BBABABBBB
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-*	-1	GSGTDF	LBAABB
F	heavy	Homo.sapiens	Hu_IGHV1-58*01	98.6	Hu_IGHV1-58*01	84.6	H1	13	H1-13-1	19	KASGFTFSGSAVQ	BBBLBBAAABBBB
F	heavy	Homo.sapiens	Hu_IGHV1-58*01	98.6	Hu_IGHV1-58*01	100.0	H2	10	H2-10-1	18	WIVVGSGNTN	BBBAAALBBB
F	heavy	Homo.sapiens	Hu_IGHV1-58*01	98.6	Hu_IGHV1-58*01	100.0	H3	16	H3-16-*	-1	AAPYcsSTSCRDGFDI
F	heavy	Homo.sapiens	Hu_IGHV1-58*01	98.6	Hu_IGHV1-58*01	100.0	H4	8	H4-8-1	8	RDMSTSTA	BBAAALBB
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	91.7	L1	12	L1-12-1	17	RASQSVRsSYLA	BBABBBBAAABB
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	20	YGASSRAT	BLLABBBB
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	85.7	L3	9	L3-9-*	-1	QQYGRSPWT	BBABABBBB
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-*	-1	GSGTDF	LBAABB
H	heavy	Homo.sapiens	Hu_IGHV1-58*01	98.6	Hu_IGHV1-58*01	84.6	H1	13	H1-13-1	19	KASGFTFSGSAVQ	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-58*01	98.6	Hu_IGHV1-58*01	100.0	H2	10	H2-10-1	18	WIVVGSGNTN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-58*01	98.6	Hu_IGHV1-58*01	100.0	H3	16	H3-16-*	-1	AAPYcsSTSCRDGFDI
H	heavy	Homo.sapiens	Hu_IGHV1-58*01	98.6	Hu_IGHV1-58*01	100.0	H4	8	H4-8-1	8	RDMSTSTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	91.7	L1	12	L1-12-1	17	RASQSVRsSYLA	BBABBBBAAABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	20	YGASSRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	85.7	L3	9	L3-9-*	-1	QQYGRSPWT	BBABABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-*	-1	GSGTDF	LBAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022