PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7DV4

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	84.6	H1	13	H1-13-1	20	AVSGFTVSKNYMS	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	66.7	H2	9	H2-9-1	10	VVYSGGSKT	BBBAALBBB
B	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H3	13	H3-13-*	-1	ARAVPHSPSSFDI	BBBBAABBBAABB
B	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H4	8	H4-8-1	11	RDNSKNTL	BBAAALBB
D	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	84.6	H1	13	H1-13-1	14	AVSGFTVSKNYMS	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	66.7	H2	9	H2-9-1	10	VVYSGGSKT	BBBAALBBB
D	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H3	13	H3-13-*	-1	ARAVPHSPSSFDI	BBBBAABBBAABB
D	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H4	8	H4-8-1	10	RDNSKNTL	BBAAALBB
F	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	84.6	H1	13	H1-13-1	15	AVSGFTVSKNYMS	BBBLBBAAABBBB
F	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	66.7	H2	9	H2-9-1	14	VVYSGGSKT	BBBAALBBB
F	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H3	13	H3-13-*	-1	ARAVPHSPSSFDI	BBBBAABBBAABB
F	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	84.6	H1	13	H1-13-1	15	AVSGFTVSKNYMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	66.7	H2	9	H2-9-1	13	VVYSGGSKT	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H3	13	H3-13-*	-1	ARAVPHSPSSFDI	BBBBAABBBAABB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022