PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7DK2

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	100.0	H1	13	H1-13-1	8	AASGFTFSSYWMS	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	90.0	H2	10	H2-10-2	11	NIKQDASEKY	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	100.0	H3	13	H3-13-*	-1	ARDLGILWFGDYP	BBBBEBBBBBBBa
A	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	100.0	H4	8	H4-8-1	8	RDNAKNSL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-NL1*01	98.6	Hu_IGKV1-NL1*01	100.0	L1	11	L1-11-1	9	RASQGISNSLA	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-NL1*01	98.6	Hu_IGKV1-NL1*01	87.5	L2	8	L2-8-1	9	YAASTLES	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-NL1*01	98.6	Hu_IGKV1-NL1*01	85.7	L3	9	L3-9-cis7-1	15	QQFYSTPRT	BBBABBbBB
B	kappa	Homo.sapiens	Hu_IGKV1-NL1*01	98.6	Hu_IGKV1-NL1*01	83.3	L4	6	L4-6-1	8	GSGTDF	EBEABB
D	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	100.0	H1	13	H1-13-1	8	AASGFTFSSYWMS	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	90.0	H2	10	H2-10-2	11	NIKQDASEKY	BBBAALABBB
D	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	100.0	H3	13	H3-13-*	-1	ARDLGILWFGDYP	BBBBEBBBBBBBa
D	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	100.0	H4	8	H4-8-1	8	RDNAKNSL	BBAAALBB
E	kappa	Homo.sapiens	Hu_IGKV1-NL1*01	98.6	Hu_IGKV1-NL1*01	100.0	L1	11	L1-11-1	9	RASQGISNSLA	BBABBAEABBB
E	kappa	Homo.sapiens	Hu_IGKV1-NL1*01	98.6	Hu_IGKV1-NL1*01	87.5	L2	8	L2-8-1	10	YAASTLES	BLLABBBB
E	kappa	Homo.sapiens	Hu_IGKV1-NL1*01	98.6	Hu_IGKV1-NL1*01	85.7	L3	9	L3-9-cis7-1	16	QQFYSTPRT	BBBABBbBB
E	kappa	Homo.sapiens	Hu_IGKV1-NL1*01	98.6	Hu_IGKV1-NL1*01	83.3	L4	6	L4-6-1	9	GSGTDF	EBEABB
G	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	100.0	H1	13	H1-13-1	8	AASGFTFSSYWMS	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	90.0	H2	10	H2-10-2	11	NIKQDASEKY	BBBAALABBB
G	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	100.0	H3	13	H3-13-*	-1	ARDLGILWFGDYP	BBBBEBBBBBBBa
G	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	100.0	H4	8	H4-8-1	8	RDNAKNSL	BBAAALBB
H	kappa	Homo.sapiens	Hu_IGKV1-NL1*01	98.6	Hu_IGKV1-NL1*01	100.0	L1	11	L1-11-1	9	RASQGISNSLA	BBABBAEABBB
H	kappa	Homo.sapiens	Hu_IGKV1-NL1*01	98.6	Hu_IGKV1-NL1*01	87.5	L2	8	L2-8-1	9	YAASTLES	BLLABBBB
H	kappa	Homo.sapiens	Hu_IGKV1-NL1*01	98.6	Hu_IGKV1-NL1*01	85.7	L3	9	L3-9-cis7-1	16	QQFYSTPRT	BBBABBbBB
H	kappa	Homo.sapiens	Hu_IGKV1-NL1*01	98.6	Hu_IGKV1-NL1*01	83.3	L4	6	L4-6-1	8	GSGTDF	EBEABB
J	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	100.0	H1	13	H1-13-1	8	AASGFTFSSYWMS	BBBLBBAAABBBB
J	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	90.0	H2	10	H2-10-2	11	NIKQDASEKY	BBBAALABBB
J	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	100.0	H3	13	H3-13-*	-1	ARDLGILWFGDYP	BBBBEBBBBBBBa
J	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	100.0	H4	8	H4-8-1	8	RDNAKNSL	BBAAALBB
K	kappa	Homo.sapiens	Hu_IGKV1-NL1*01	98.6	Hu_IGKV1-NL1*01	100.0	L1	11	L1-11-1	8	RASQGISNSLA	BBABBAEABBB
K	kappa	Homo.sapiens	Hu_IGKV1-NL1*01	98.6	Hu_IGKV1-NL1*01	87.5	L2	8	L2-8-1	9	YAASTLES	BLLABBBB
K	kappa	Homo.sapiens	Hu_IGKV1-NL1*01	98.6	Hu_IGKV1-NL1*01	85.7	L3	9	L3-9-cis7-1	16	QQFYSTPRT	BBBABBbBB
K	kappa	Homo.sapiens	Hu_IGKV1-NL1*01	98.6	Hu_IGKV1-NL1*01	83.3	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022