PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7DET

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Mus.musculus	Mo_IGHV1S82*01	80.3	Mo_IGHV1S82*01	92.3	H1	13	H1-13-1	10	KASGYSFTSYWVN	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV1S82*01	80.3	Mo_IGHV1S82*01	100.0	H2	10	H2-10-1	12	MIHPSDSETR	BBBAAALBBB
B	heavy	Mus.musculus	Mo_IGHV1S82*01	80.3	Mo_IGHV1S82*01	0.0	H3	12	H3-12-*	-1	ARADGYEWYFDV	BBBBBLALBBAB
B	heavy	Mus.musculus	Mo_IGHV1S82*01	80.3	Mo_IGHV1S82*01	87.5	H4	8	H4-8-1	6	VDKSTSTA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV3-5*01	92.8	Mo_IGKV3-5*01	100.0	L1	15	L1-15-1	9	RASESVDSYgnsfMH	BBABBABBLLBBBBB
B	kappa	Mus.musculus	Mo_IGKV3-5*01	92.8	Mo_IGKV3-5*01	100.0	L2	8	L2-8-1	9	YRASNLES	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV3-5*01	92.8	Mo_IGKV3-5*01	100.0	L3	9	L3-9-cis7-1	7	QQSNEDPWT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV3-5*01	92.8	Mo_IGKV3-5*01	83.3	L4	6	L4-6-1	5	GSGTDF	EBEABB
D	heavy	Mus.musculus	Mo_IGHV1S82*01	80.3	Mo_IGHV1S82*01	92.3	H1	13	H1-13-1	9	KASGYSFTSYWVN	BBBLBBAAABBBB
D	heavy	Mus.musculus	Mo_IGHV1S82*01	80.3	Mo_IGHV1S82*01	100.0	H2	10	H2-10-1	11	MIHPSDSETR	BBBAAALBBB
D	heavy	Mus.musculus	Mo_IGHV1S82*01	80.3	Mo_IGHV1S82*01	0.0	H3	12	H3-12-*	-1	ARADGYEWYFDV	BBBBBLALBBAB
D	heavy	Mus.musculus	Mo_IGHV1S82*01	80.3	Mo_IGHV1S82*01	87.5	H4	8	H4-8-1	5	VDKSTSTA	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV3-5*01	92.8	Mo_IGKV3-5*01	100.0	L1	15	L1-15-1	10	RASESVDSYgnsfMH	BBABBABBLLBBBBB
D	kappa	Mus.musculus	Mo_IGKV3-5*01	92.8	Mo_IGKV3-5*01	100.0	L2	8	L2-8-1	9	YRASNLES	BLLABBBB
D	kappa	Mus.musculus	Mo_IGKV3-5*01	92.8	Mo_IGKV3-5*01	100.0	L3	9	L3-9-cis7-1	7	QQSNEDPWT	BBAABBbBB
D	kappa	Mus.musculus	Mo_IGKV3-5*01	92.8	Mo_IGKV3-5*01	83.3	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022