PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7DEO

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-33*03	97.3	Hu_IGHV3-33*03	92.3	H1	13	H1-13-1	8	AASGFTFSYYGMH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-33*03	97.3	Hu_IGHV3-33*03	80.0	H2	10	H2-10-2	10	VIWYDGSNRF	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-33*03	97.3	Hu_IGHV3-33*03	50.0	H3	13	H3-13-*	-1	ATDPPGLRFRFDY	BBBBBELEBBBAB
A	heavy	Homo.sapiens	Hu_IGHV3-33*03	97.3	Hu_IGHV3-33*03	87.5	H4	8	H4-8-1	8	RDNSKSTL	BBAAALBB
A	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L1	16	L1-16-1	11	RSSQSLlhsngYNYLD	BBABBABBAALBBBBB
A	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L2	8	L2-8-1	6	YLGSNRAS	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	85.7	L3	9	L3-9-cis7-1	8	MQGLQTPLT	BBAABBbBB
A	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-33*03	97.3	Hu_IGHV3-33*03	92.3	H1	13	H1-13-1	8	AASGFTFSYYGMH	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-33*03	97.3	Hu_IGHV3-33*03	80.0	H2	10	H2-10-2	9	VIWYDGSNRF	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-33*03	97.3	Hu_IGHV3-33*03	50.0	H3	13	H3-13-*	-1	ATDPPGLRFRFDY	BBBBBELEBBBAB
C	heavy	Homo.sapiens	Hu_IGHV3-33*03	97.3	Hu_IGHV3-33*03	87.5	H4	8	H4-8-1	6	RDNSKSTL	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L1	16	L1-16-1	12	RSSQSLlhsngYNYLD	BBABBABBAALBBBBB
C	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L2	8	L2-8-1	7	YLGSNRAS	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	85.7	L3	9	L3-9-cis7-1	9	MQGLQTPLT	BBAABBbBB
C	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022