PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7DD2

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV3S1*01	97.3	Mo_IGHV3S1*01	84.6	H1	13	H1-13-*	-1	SVTGDSITNGYWN	BBBLBBBABEBBB
A	heavy	Mus.musculus	Mo_IGHV3S1*01	97.3	Mo_IGHV3S1*01	100.0	H2	9	H2-9-1	17	YISYSGSTY	BBBAALBBB
A	heavy	Mus.musculus	Mo_IGHV3S1*01	97.3	Mo_IGHV3S1*01	50.0	H3	13	H3-13-*	-1	ASDYHGSKYYFDY	BBBBBELLBBBBB
A	heavy	Mus.musculus	Mo_IGHV3S1*01	97.3	Mo_IGHV3S1*01	87.5	H4	8	H4-8-1	16	RDTSKNQH	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV6-23*01	98.6	Mo_IGKV6-23*01	81.8	L1	11	L1-11-1	18	KASQDVGNDVA	BBABBAEABBB
B	kappa	Mus.musculus	Mo_IGKV6-23*01	98.6	Mo_IGKV6-23*01	100.0	L2	8	L2-8-1	20	YWASTRHT	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV6-23*01	98.6	Mo_IGKV6-23*01	71.4	L3	9	L3-9-cis7-1	22	QQYNRYPYT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV6-23*01	98.6	Mo_IGKV6-23*01	100.0	L4	6	L4-6-1	27	GSGTDF	EBEABB
E	heavy	Mus.musculus	Mo_IGHV3S1*01	97.3	Mo_IGHV3S1*01	84.6	H1	13	H1-13-*	-1	SVTGDSITNGYWN	BBBLBBBABEBBB
E	heavy	Mus.musculus	Mo_IGHV3S1*01	97.3	Mo_IGHV3S1*01	100.0	H2	9	H2-9-*	-1	YISYSGSTY	BBBAALBBB
E	heavy	Mus.musculus	Mo_IGHV3S1*01	97.3	Mo_IGHV3S1*01	50.0	H3	13	H3-13-*	-1	ASDYHGSKYYFDY	BBBBBELLBBBBB
E	heavy	Mus.musculus	Mo_IGHV3S1*01	97.3	Mo_IGHV3S1*01	87.5	H4	8	H4-8-1	18	RDTSKNQH	BBAAALBB
H	kappa	Mus.musculus	Mo_IGKV6-23*01	98.6	Mo_IGKV6-23*01	81.8	L1	11	L1-11-1	22	KASQDVGNDVA	BBABBAEABBB
H	kappa	Mus.musculus	Mo_IGKV6-23*01	98.6	Mo_IGKV6-23*01	100.0	L2	8	L2-8-1	21	YWASTRHT	BLLABBBB
H	kappa	Mus.musculus	Mo_IGKV6-23*01	98.6	Mo_IGKV6-23*01	71.4	L3	9	L3-9-cis7-1	25	QQYNRYPYT	BBAABBbBB
H	kappa	Mus.musculus	Mo_IGKV6-23*01	98.6	Mo_IGKV6-23*01	100.0	L4	6	L4-6-1	18	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022