PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7DC8

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	lambda	Homo.sapiens	Hu_IGLV2-8*01	97.1	Hu_IGLV2-8*01	78.6	L1	14	L1-14-*	-1	TGTSTDVGDYaYVS	BBABABAAAAAABB
A	lambda	Homo.sapiens	Hu_IGLV2-8*01	97.1	Hu_IGLV2-8*01	62.5	L2	8	L2-8-1	17	YYVSKKPD	BLEABBBB
A	lambda	Homo.sapiens	Hu_IGLV2-8*01	97.1	Hu_IGLV2-8*01	11.1	L3	10	L3-10-*	-1	SLRSPGPYPL	BBBBABBBBB
A	lambda	Homo.sapiens	Hu_IGLV2-8*01	97.1	Hu_IGLV2-8*01	100.0	L4	6	L4-6-2	14	KSGNTA	BBEABB
B	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	92.3	H1	13	H1-13-1	13	AASGFTFSSYTMN	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	70.0	H2	10	H2-10-2	10	SISSQSYHIY	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	100.0	H3	15	H3-15-*	-1	ARYGKlYSLNWVFDY
B	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	100.0	H4	8	H4-8-1	8	RDNAKNSL	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV2-8*01	97.1	Hu_IGLV2-8*01	78.6	L1	14	L1-14-*	-1	TGTSTDVGDYaYVS	BBABABAAAAAABB
D	lambda	Homo.sapiens	Hu_IGLV2-8*01	97.1	Hu_IGLV2-8*01	62.5	L2	8	L2-8-1	15	YYVSKKPD	BLEABBBB
D	lambda	Homo.sapiens	Hu_IGLV2-8*01	97.1	Hu_IGLV2-8*01	11.1	L3	10	L3-10-*	-1	SLRSPGPYPL	BBBBABABBB
D	lambda	Homo.sapiens	Hu_IGLV2-8*01	97.1	Hu_IGLV2-8*01	100.0	L4	6	L4-6-2	11	KSGNTA	BBEABB
E	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	92.3	H1	13	H1-13-1	13	AASGFTFSSYTMN	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	70.0	H2	10	H2-10-2	11	SISSQSYHIY	BBBAALABBB
E	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	100.0	H3	15	H3-15-*	-1	ARYGKlYSLNWVFDY
E	heavy	Homo.sapiens	Hu_IGHV3-21*01	97.3	Hu_IGHV3-21*01	100.0	H4	8	H4-8-1	9	RDNAKNSL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022