PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7D85

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	84.6	H1	13	H1-13-1	8	AASGFTFSDYDMS	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	40.0	H2	10	H2-10-2	15	TIDLDSGSIY	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H3	14	H3-14-*	-1	AKDLHMGPEGPFDY	BBBBBLBABEbLAB
B	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
C	lambda	Homo.sapiens	Hu_IGLV1-47*02	100.0	Hu_IGLV1-47*02	84.6	L1	13	L1-13-1	17	SGSSSNIGSNSVS	BBBAAAAAABBBB
C	lambda	Homo.sapiens	Hu_IGLV1-47*02	100.0	Hu_IGLV1-47*02	75.0	L2	8	L2-8-1	10	YSDNHRPS	BLEABBBB
C	lambda	Homo.sapiens	Hu_IGLV1-47*02	100.0	Hu_IGLV1-47*02	66.7	L3	11	L3-11-1	13	QGWDTSLSGHV	BBBBAAALBBB
C	lambda	Homo.sapiens	Hu_IGLV1-47*02	100.0	Hu_IGLV1-47*02	100.0	L4	6	L4-6-2	7	KSGTSA	BBEABB
E	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	84.6	H1	13	H1-13-1	9	AASGFTFSDYDMS	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	40.0	H2	10	H2-10-2	14	TIDLDSGSIY	BBBAALABBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H3	14	H3-14-*	-1	AKDLHMGPEGPFDY	BBBBBLBABEbLAB
E	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
F	lambda	Homo.sapiens	Hu_IGLV1-47*02	100.0	Hu_IGLV1-47*02	84.6	L1	13	L1-13-1	15	SGSSSNIGSNSVS	BBBAABAAABBBB
F	lambda	Homo.sapiens	Hu_IGLV1-47*02	100.0	Hu_IGLV1-47*02	75.0	L2	8	L2-8-1	15	YSDNHRPS	BLEABBBB
F	lambda	Homo.sapiens	Hu_IGLV1-47*02	100.0	Hu_IGLV1-47*02	66.7	L3	11	L3-11-1	11	QGWDTSLSGHV	BBBBAAALBBB
F	lambda	Homo.sapiens	Hu_IGLV1-47*02	100.0	Hu_IGLV1-47*02	100.0	L4	6	L4-6-2	7	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022