PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7D3K

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Bos.taurus	Bo_IGHV1-20*01	95.9	Bo_IGHV1-20*01	76.9	H1	13	H1-13-*	-1	TISGFSLSSYTIG	BBBABBAAABBBB
H	heavy	Bos.taurus	Bo_IGHV1-20*01	95.9	Bo_IGHV1-20*01	44.4	H2	9	H2-9-*	-1	DMSNGGMPY	BBBBLLBBB
H	heavy	Bos.taurus	Bo_IGHV1-20*01	95.9	Bo_IGHV1-20*01	100.0	H3	18	H3-18-*	-1	AKSRYTGDGsiglYGVDA
H	heavy	Bos.taurus	Bo_IGHV1-20*01	95.9	Bo_IGHV1-20*01	87.5	H4	8	H4-8-*	-1	KHNSKSQV	BBABLLBB
L	lambda	Bos.taurus	Bo_IGLV1-31*01	98.5	Bo_IGLV1-31*01	85.7	L1	14	L1-14-*	-1	SGTYSNVGTgNYVS	BBBAAAAABLBBBB
L	lambda	Bos.taurus	Bo_IGLV1-31*01	98.5	Bo_IGLV1-31*01	62.5	L2	8	L2-8-*	-1	YSVTNRAS	BAABBBLE
L	lambda	Bos.taurus	Bo_IGLV1-31*01	98.5	Bo_IGLV1-31*01	75.0	L3	10	L3-10-*	-1	LSWQSGNTAL	BBBBAABABB
L	lambda	Bos.taurus	Bo_IGLV1-31*01	98.5	Bo_IGLV1-31*01	83.3	L4	6	L4-6-*	-1	RSGHTA	BBABBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022