PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7D30

#CDRs = 4; #Clusters = 5.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-1	11	AASGFPVEVWRME	BBBLBBAAABBBB
A	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	CDRLenMismatch	-1.0	H2	10	H2-10-*	-1	AIESYGHGTR	BBBBEAAEBB
A	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	50.0	H3	14	H3-14-*	-1	NVKDDGQLAYHYDy
A	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	10	RDNAKNTV	BBAAALBB
A	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	Al_IGHV3-3*01_VHH	38.5	H1	13	H1-13-1	12	AASGFPVWQGEMA	BBBLBBAAABBBB
A	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	Al_IGHV3-3*01_VHH	60.0	H2	10	H2-10-*	-1	AISSMGYKTY	BBBBLBABBB
A	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	Al_IGHV3-3*01_VHH	50.0	H3	8	H3-8-*	-1	AVMVGFWY	BBBBEBBB
A	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	9	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022