PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7D0C

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L1	12	L1-12-*	-1	RASQSVSsSYLA	BBABBBBBLBBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-*	-1	YGASSRAT	BLLABBBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L3	9	L3-9-2	23	QQYGSSPRT	BBAABABBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	26	GSGTDF	EBEABB
G	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H1	13	H1-13-1	24	AASGFTVSSNYMS	BBBLBBAABBBBB
G	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H2	9	H2-9-1	15	VIYSGGSTY	BBBAALBBB
G	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H3	11	H3-11-*	-1	ARDYGDFYFDY	BBBBEALBBAB
G	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H4	8	H4-8-1	15	RDNSKNTL	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H1	13	H1-13-1	24	AASGFTVSSNYMS	BBBLBBAABBBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H2	9	H2-9-1	15	VIYSGGSTY	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H3	11	H3-11-*	-1	ARDYGDFYFDY	BBBBEALBBAB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H4	8	H4-8-1	15	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L1	12	L1-12-*	-1	RASQSVSsSYLA	BBABBBBBLBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-*	-1	YGASSRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L3	9	L3-9-2	23	QQYGSSPRT	BBAABABBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	26	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022