PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7CZS

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H1	13	H1-13-*	-1	AASGFTVSSNYMS	BBBEBLAABBBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	77.8	H2	9	H2-9-*	-1	VIYPGGSTF	BBBBLEBAL
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H3	9	H3-9-*	-1	ARETLAFDY	BBBBLAEEL
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H4	8	H4-8-1	11	RDNSKNTL	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H1	13	H1-13-*	-1	AASGFTVSSNYMS	BBBEBLAABBBBB
I	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	77.8	H2	9	H2-9-*	-1	VIYPGGSTF	BBBBLEBAL
I	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H3	9	H3-9-*	-1	ARETLAFDY	BBBBLAEEL
I	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H4	8	H4-8-1	11	RDNSKNTL	BBAAALBB
J	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H1	13	H1-13-*	-1	AASGFTVSSNYMS	BBBEBLAABBBBB
J	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	77.8	H2	9	H2-9-*	-1	VIYPGGSTF	BBBBLEBAL
J	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H3	9	H3-9-*	-1	ARETLAFDY	BBBBLAEEL
J	heavy	Homo.sapiens	Hu_IGHV3-53*01	100.0	Hu_IGHV3-53*01	100.0	H4	8	H4-8-1	11	RDNSKNTL	BBAAALBB
K	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	100.0	L1	11	L1-11-*	-1	RASQGISSYLA	BBBBBBBABBE
K	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	100.0	L2	8	L2-8-*	-1	YAASTLQS	BAEABBBB
K	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	100.0	L3	9	L3-9-*	-1	QQLNSYPPA	BLBEBABBB
K	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	100.0	L4	6	L4-6-*	-1	GSGTEF	BBABLB
M	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	100.0	L1	11	L1-11-*	-1	RASQGISSYLA	BBBBBBBABBE
M	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	100.0	L2	8	L2-8-*	-1	YAASTLQS	BAEABBBB
M	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	100.0	L3	9	L3-9-*	-1	QQLNSYPPA	BLBEBABBB
M	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	100.0	L4	6	L4-6-*	-1	GSGTEF	BBABLB
N	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	100.0	L1	11	L1-11-*	-1	RASQGISSYLA	BBBBBBBABBE
N	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	100.0	L2	8	L2-8-*	-1	YAASTLQS	BAEABBBB
N	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	100.0	L3	9	L3-9-*	-1	QQLNSYPPA	BLBEBABBB
N	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	100.0	L4	6	L4-6-*	-1	GSGTEF	BBABLB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022