PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7CZ0

#CDRs = 4; #Clusters = 5.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-1	12	AASGFPVDTQWMH	BBBLBBAAABBBB
E	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	CDRLenMismatch	-1.0	H2	10	H2-10-2	7	AISSTGRSTF	BBBAALABBB
E	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	0.0	H3	8	H3-8-*	-1	TVYVGNRY	BBBBLBBB
E	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	7	RDNAKNTV	BBAAALBB
F	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-1	12	AASGFPVDTQWMH	BBBLBBAAABBBB
F	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	CDRLenMismatch	-1.0	H2	10	H2-10-2	6	AISSTGRSTF	BBBAALABBB
F	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	0.0	H3	8	H3-8-*	-1	TVYVGNRY	BBBBLBBB
F	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	10	RDNAKNTV	BBAAALBB
G	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-1	13	AASGFPVDTQWMH	BBBLBBAAABBBB
G	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	CDRLenMismatch	-1.0	H2	10	H2-10-2	6	AISSTGRSTF	BBBAALABBB
G	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	0.0	H3	8	H3-8-*	-1	TVYVGNRY	BBBBLBBB
G	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-1	8	RDNAKNTV	BBAAALBB
H	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	38.5	H1	13	H1-13-1	16	AASGFPVDTQWMH	BBBLBBAAABBBB
H	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	CDRLenMismatch	-1.0	H2	10	H2-10-2	6	AISSTGRSTF	BBBAALABBB
H	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	0.0	H3	8	H3-8-*	-1	TVYVGNRY	BBBBLBBB
H	heavy	Synthetic.construct	La_IGHV1S3*01_VHH	98.6	La_IGHV1S3*01_VHH	100.0	H4	8	H4-8-*	-1	RDNAKNTV	BBABLLBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022