PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7CWM

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	heavy	Homo.sapiens	Hu_IGHV3-30*01	100.0	Hu_IGHV3-30*01	100.0	H1	13	H1-13-1	24	AASGFTFSSYAMH	BBBEBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV3-30*01	100.0	Hu_IGHV3-30*01	100.0	H2	10	H2-10-*	-1	VISYDGSNKY	BBBAABBBBB
G	heavy	Homo.sapiens	Hu_IGHV3-30*01	100.0	Hu_IGHV3-30*01	100.0	H3	12	H3-12-*	-1	ARHATLMNNKDI	BBBBBLABBABB
G	heavy	Homo.sapiens	Hu_IGHV3-30*01	100.0	Hu_IGHV3-30*01	100.0	H4	8	H4-8-1	13	RDNSKNTL	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*01	100.0	Hu_IGHV3-30*01	100.0	H1	13	H1-13-1	24	AASGFTFSSYAMH	BBBEBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*01	100.0	Hu_IGHV3-30*01	100.0	H2	10	H2-10-*	-1	VISYDGSNKY	BBBAABBBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*01	100.0	Hu_IGHV3-30*01	100.0	H3	12	H3-12-*	-1	ARHATLMNNKDI	BBBBBLABBABB
H	heavy	Homo.sapiens	Hu_IGHV3-30*01	100.0	Hu_IGHV3-30*01	100.0	H4	8	H4-8-1	13	RDNSKNTL	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV3-30*01	100.0	Hu_IGHV3-30*01	100.0	H1	13	H1-13-1	24	AASGFTFSSYAMH	BBBEBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV3-30*01	100.0	Hu_IGHV3-30*01	100.0	H2	10	H2-10-*	-1	VISYDGSNKY	BBBAABBBBB
I	heavy	Homo.sapiens	Hu_IGHV3-30*01	100.0	Hu_IGHV3-30*01	100.0	H3	12	H3-12-*	-1	ARHATLMNNKDI	BBBBBLABBABB
I	heavy	Homo.sapiens	Hu_IGHV3-30*01	100.0	Hu_IGHV3-30*01	100.0	H4	8	H4-8-1	13	RDNSKNTL	BBAAALBB
J	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L1	11	L1-11-*	-1	RASQSISSYLN	BBABBBAABBB
J	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L2	8	L2-8-*	-1	YAASSLQS	BLLABBBB
J	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L3	9	L3-9-cis7-1	14	QQSYSTPRT	BBAABBbBB
J	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB
K	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L1	11	L1-11-*	-1	RASQSISSYLN	BBABBBAABBB
K	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L2	8	L2-8-*	-1	YAASSLQS	BLLABBBB
K	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L3	9	L3-9-cis7-1	14	QQSYSTPRT	BBAABBbBB
K	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L1	11	L1-11-*	-1	RASQSISSYLN	BBABBBAABBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L2	8	L2-8-*	-1	YAASSLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L3	9	L3-9-cis7-1	14	QQSYSTPRT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022