PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7COE

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV1-69*17	97.3	Hu_IGHV1-69*17	61.5	H1	13	H1-13-*	-1	KTSGGTFNNNAIN	BBBLLBALLBBBB
B	heavy	Homo.sapiens	Hu_IGHV1-69*17	97.3	Hu_IGHV1-69*17	80.0	H2	10	H2-10-1	14	GIIPFFGIAK	BBBAAALBBB
B	heavy	Homo.sapiens	Hu_IGHV1-69*17	97.3	Hu_IGHV1-69*17	100.0	H3	24	H3-24-*	-1	ARDlpressygsgSYYTHYYAMDV
B	heavy	Homo.sapiens	Hu_IGHV1-69*17	97.3	Hu_IGHV1-69*17	87.5	H4	8	H4-8-1	6	ADESTSTA	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV3D-20*01	100.0	Hu_IGKV3D-20*01	100.0	L1	12	L1-12-2	4	GASQSVSsSYLA	BBABBBBLLBBB
C	kappa	Homo.sapiens	Hu_IGKV3D-20*01	100.0	Hu_IGKV3D-20*01	100.0	L2	8	L2-8-1	4	YDASSRAT	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV3D-20*01	100.0	Hu_IGKV3D-20*01	100.0	L3	9	L3-9-cis7-1	5	QQYGSSPLT	BBAABBbBB
C	kappa	Homo.sapiens	Hu_IGKV3D-20*01	100.0	Hu_IGKV3D-20*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	97.3	Hu_IGHV1-69*17	61.5	H1	13	H1-13-*	-1	KTSGGTFNNNAIN	BBBLBBALLBBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	97.3	Hu_IGHV1-69*17	80.0	H2	10	H2-10-1	14	GIIPFFGIAK	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	97.3	Hu_IGHV1-69*17	100.0	H3	24	H3-24-*	-1	ARDlpressygsgSYYTHYYAMDV
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	97.3	Hu_IGHV1-69*17	87.5	H4	8	H4-8-1	5	ADESTSTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*01	100.0	Hu_IGKV3D-20*01	100.0	L1	12	L1-12-2	4	GASQSVSsSYLA	BBABBBBLLBBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*01	100.0	Hu_IGKV3D-20*01	100.0	L2	8	L2-8-1	4	YDASSRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*01	100.0	Hu_IGKV3D-20*01	100.0	L3	9	L3-9-cis7-1	5	QQYGSSPLT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*01	100.0	Hu_IGKV3D-20*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022