PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7CJF

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	92.3	H1	13	H1-13-1	25	AASGFIVSSNYMS	BBBEBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	77.8	H2	9	H2-9-1	10	IIYSGGSTF	BBBAALBBB
A	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	100.0	H3	12	H3-12-*	-1	ARDLQELGSLDY	BBBAEAAAEBAB
A	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	100.0	H4	8	H4-8-1	6	RDNSKNTL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-12*01	100.0	Hu_IGKV1-12*01	100.0	L1	11	L1-11-1	5	RASQGISSWLA	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-12*01	100.0	Hu_IGKV1-12*01	100.0	L2	8	L2-8-1	5	YAASSLQS	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-12*01	100.0	Hu_IGKV1-12*01	85.7	L3	9	L3-9-cis7-*	-1	QEANSFPYT	BBAABBaLB
B	kappa	Homo.sapiens	Hu_IGKV1-12*01	100.0	Hu_IGKV1-12*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022