PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7CJ2

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	92.3	H1	13	H1-13-1	12	AASGFTFSNYAMS	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	80.0	H2	10	H2-10-2	13	GISGSGGTTY	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	50.0	H3	8	H3-8-*	-1	AGVGTFDV	BBBEABBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	100.0	H4	8	H4-8-1	5	RDNSKNTL	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	81.8	L1	11	L1-11-1	7	RASQTISSWLN	BBABBAEABBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	6	YAASRLQS	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L3	9	L3-9-cis7-1	8	QQSYSTPLT	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB
K	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	92.3	H1	13	H1-13-1	12	AASGFTFSNYAMS	BBBLBBAAABBBB
K	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	80.0	H2	10	H2-10-2	16	GISGSGGTTY	BBBAALABBB
K	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	50.0	H3	8	H3-8-*	-1	AGVGTFDV	BBBEABBB
K	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	100.0	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	81.8	L1	11	L1-11-1	9	RASQTISSWLN	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	5	YAASRLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L3	9	L3-9-cis7-1	13	QQSYSTPLT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022