PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7CHO

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	92.3	H1	13	H1-13-1	21	AASGFIVSSNYMS	BBBEBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	88.9	H2	9	H2-9-1	12	IIYSGGSTY	BBBAALBBB
B	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	100.0	H3	15	H3-15-*	-1	ARALQVgATSDYFDY
B	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	87.5	H4	8	H4-8-1	9	RDNSNNTL	BBAAALBB
C	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	100.0	L1	14	L1-14-3	9	TGSSSNIGAgYDVH	BBBAAAAAALBBBB
C	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	100.0	L2	8	L2-8-1	11	YGNSNRPS	BLLABBBB
C	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	77.8	L3	11	L3-11-*	-1	QSCDSslsVVV
C	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	100.0	L4	6	L4-6-2	17	KSGTSA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	92.3	H1	13	H1-13-1	25	AASGFIVSSNYMS	BBBEBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	88.9	H2	9	H2-9-1	9	IIYSGGSTY	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	100.0	H3	15	H3-15-*	-1	ARALQVgATSDYFDY
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	87.5	H4	8	H4-8-1	13	RDNSNNTL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	100.0	L1	14	L1-14-3	8	TGSSSNIGAgYDVH	BBBAAAAAALBBBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	100.0	L2	8	L2-8-1	11	YGNSNRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	77.8	L3	11	L3-11-*	-1	QSCDSSLSVVV	BBBBAABBBBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	100.0	L4	6	L4-6-2	11	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022