PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7CGW

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV4-61*08	97.3	Mo_IGHV2-9*02	100.0	H1	13	H1-13-1	12	TVSGFSLTSYGVH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV4-61*08	97.3	Mo_IGHV2-9*02	77.8	H2	9	H2-9-1	19	VIYADGSTN	BBBAALBBB
A	heavy	Homo.sapiens	Hu_IGHV4-61*08	97.3	Hu_IGHV4-61*08	100.0	H3	12	H3-12-*	-1	ARAYGNYWYIDV	BBBBEBLBBBAB
A	heavy	Homo.sapiens	Hu_IGHV4-61*08	97.3	Hu_IGHV4-61*08	75.0	H4	8	H4-8-1	6	KDTSKNQV	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Mo_IGKV6-32*01	81.8	L1	11	L1-11-*	-1	KSSESVSNDVA	BBABBBBLBBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Mo_IGKV6-32*01	50.0	L2	8	L2-8-1	12	NYAFHRFT	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	57.1	L3	9	L3-9-cis7-1	17	HQAYSSPYT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	83.3	L4	6	L4-6-1	9	GYGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV4-61*08	97.3	Mo_IGHV2-9*02	100.0	H1	13	H1-13-1	13	TVSGFSLTSYGVH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-61*08	97.3	Mo_IGHV2-9*02	77.8	H2	9	H2-9-1	19	VIYADGSTN	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-61*08	97.3	Hu_IGHV4-61*08	100.0	H3	12	H3-12-*	-1	ARAYGNYWYIDV	BBBBEBLBBBAB
H	heavy	Homo.sapiens	Hu_IGHV4-61*08	97.3	Hu_IGHV4-61*08	75.0	H4	8	H4-8-1	6	KDTSKNQV	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Mo_IGKV6-32*01	81.8	L1	11	L1-11-*	-1	KSSESVSNDVA	BBABBBAABBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Mo_IGKV6-32*01	50.0	L2	8	L2-8-1	12	NYAFHRFT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	57.1	L3	9	L3-9-cis7-1	18	HQAYSSPYT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	83.3	L4	6	L4-6-1	10	GYGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022