PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7CEC

#CDRs = 8; #Clusters = 12.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
F	heavy	Homo.sapiens	Mo_IGHV5-6-4*01	97.2	Mo_IGHV5-6-4*01	100.0	H1	13	H1-13-1	17	AASGFTFSSYTMS	BBBLBBAAABBBB
F	heavy	Homo.sapiens	Mo_IGHV5-6-4*01	97.2	Mo_IGHV5-6-4*01	100.0	H2	10	H2-10-2	18	TISSGGSYTY	BBBAALABBB
F	heavy	Homo.sapiens	Mo_IGHV5-6-4*01	97.2	Mo_IGHV5-6-4*01	100.0	H3	13	H3-13-*	-1	TRIGYDEDYAMDH	BBBABAAALBBAB
F	heavy	Homo.sapiens	Mo_IGHV5-6-4*01	97.2	Mo_IGHV5-6-4*01	87.5	H4	8	H4-8-1	11	RDKAKNTL	BBAAALBB
G	kappa	Homo.sapiens	Mo_IGKV4-91*01	89.9	Mo_IGKV4-91*01	83.3	L1	12	L1-12-1	23	SVSSIISsNYLH	BBABBBBAAABB
G	kappa	Homo.sapiens	Mo_IGKV4-91*01	89.9	Mo_IGKV4-91*01	100.0	L2	8	L2-8-1	18	YRTSNLAS	BLLABBBB
G	kappa	Homo.sapiens	Mo_IGKV4-91*01	89.9	Mo_IGKV4-91*01	75.0	L3	9	L3-9-cis7-1	18	QQGSDIPLT	BBAABBbBB
G	kappa	Homo.sapiens	Mo_IGKV4-91*01	89.9	Mo_IGKV4-91*01	100.0	L4	6	L4-6-1	14	GSGTSY	EBEABB
H	heavy	Homo.sapiens	Mo_IGHV8-12*01	95.9	Mo_IGHV8-12*01	100.0	H1	15	H1-15-1	19	SFSGFSLSTSGMgvS	BBBLBBAABBLBBBB
H	heavy	Homo.sapiens	Mo_IGHV8-12*01	95.9	Mo_IGHV8-12*01	100.0	H2	9	H2-9-1	18	HIYWDDDKR	BBBAALBBB
H	heavy	Homo.sapiens	Mo_IGHV8-12*01	95.9	Mo_IGHV8-12*01	66.7	H3	14	H3-14-*	-1	ARSIYDGYYDYFDV	BBBBBALABBBBAB
H	heavy	Homo.sapiens	Mo_IGHV8-12*01	95.9	Mo_IGHV8-12*01	87.5	H4	8	H4-8-1	14	KDTSSNQV	BBAAALBB
I	kappa	Homo.sapiens	Mo_IGKV4-72*01	98.6	Mo_IGKV4-72*01	80.0	L1	10	L1-10-1	14	RATSSVTYMH	BBABBBABBB
I	kappa	Homo.sapiens	Mo_IGKV4-72*01	98.6	Mo_IGKV4-72*01	100.0	L2	8	L2-8-1	18	YATSNLAS	BLLABBBB
I	kappa	Homo.sapiens	Mo_IGKV4-72*01	98.6	Mo_IGKV4-72*01	87.5	L3	9	L3-9-cis7-1	15	QQWTSNPPT	BBAABBbBB
I	kappa	Homo.sapiens	Mo_IGKV4-72*01	98.6	Mo_IGKV4-72*01	100.0	L4	6	L4-6-1	6	GSGTSY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022