PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7CE2

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	75.0	L1	12	L1-12-*	-1	RASQSITsSFLA	BBABBBAALBBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	7	YGASSRAT	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	57.1	L3	8	L3-8-1	6	QQYDTSRT	BBAABEBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.2	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
Z	heavy	Homo.sapiens	Hu_IGHV4-59*01	89.0	Hu_IGHV4-59*01	100.0	H1	13	H1-13-*	-1	TVSGGSISSYYWS	BBBLEBAEABBBB
Z	heavy	Homo.sapiens	Hu_IGHV4-59*01	89.0	Hu_IGHV4-59*01	77.8	H2	9	H2-9-1	18	YVHYSGSTN	BBBAALBBB
Z	heavy	Homo.sapiens	Hu_IGHV4-59*01	89.0	Hu_IGHV4-59*01	100.0	H3	12	H3-12-3	13	ARDKYQTDVSDI	BBBBBLBABBAB
Z	heavy	Homo.sapiens	Hu_IGHV4-59*01	89.0	Hu_IGHV4-59*01	87.5	H4	8	H4-8-1	9	VDTSKSQF	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022