PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7CDJ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-11*01	100.0	Hu_IGHV3-11*01	100.0	H1	13	H1-13-1	14	AASGFTFSDYYMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-11*01	100.0	Hu_IGHV3-11*01	100.0	H2	10	H2-10-2	13	YISSSGSTIY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-11*01	100.0	Hu_IGHV3-11*01	100.0	H3	12	H3-12-*	-1	ARDFSHQQLVPS	BBABBAABBBBB
H	heavy	Homo.sapiens	Hu_IGHV3-11*01	100.0	Hu_IGHV3-11*01	100.0	H4	8	H4-8-*	-1	RDNAKNSL	BBAABABB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	100.0	L1	11	L1-11-2	8	RASQGISSYLA	BBABBALLBBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	100.0	L2	8	L2-8-1	11	YAASTLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	100.0	L3	9	L3-9-cis7-1	11	QQLNSYPLT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	100.0	L4	6	L4-6-1	14	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022