PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7CBP

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Homo.sapiens	Hu_IGHV3-23*01	97.3	Hu_IGHV3-23*01	69.2	H1	13	H1-13-1	20	AASGFSFSTYSMH	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-23*01	97.3	Hu_IGHV3-23*01	70.0	H2	10	H2-10-*	-1	AISGEGDSAY	BBBABAABBB
D	heavy	Homo.sapiens	Hu_IGHV3-23*01	97.3	Hu_IGHV3-23*01	0.0	H3	15	H3-15-*	-1	VGGYSNfYYYYTMDA
D	heavy	Homo.sapiens	Hu_IGHV3-23*01	97.3	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	18	RDNSKNTL	BBAAALBB
E	kappa	Homo.sapiens	Hu_IGKV3-11*01	91.3	Hu_IGKV3-11*01	63.6	L1	11	L1-11-*	-1	RATQSISTFLA	BBABBBAABBB
E	kappa	Homo.sapiens	Hu_IGKV3-11*01	91.3	Hu_IGKV3-11*01	75.0	L2	8	L2-8-*	-1	YDASTRAS	BLLABBBB
E	kappa	Homo.sapiens	Hu_IGKV3-11*01	91.3	Hu_IGKV3-11*01	85.7	L3	10	L3-10-*	-1	QQRYNWpPYS	BBABEBBbBB
E	kappa	Homo.sapiens	Hu_IGKV3-11*01	91.3	Hu_IGKV3-11*01	83.3	L4	6	L4-6-2	18	RSGTDF	BBEABB
R	heavy	Homo.sapiens	Hu_IGHV3-23*01	97.3	Hu_IGHV3-23*01	69.2	H1	13	H1-13-1	19	AASGFSFSTYSMH	BBBLBBAAABBBB
R	heavy	Homo.sapiens	Hu_IGHV3-23*01	97.3	Hu_IGHV3-23*01	70.0	H2	10	H2-10-*	-1	AISGEGDSAY	BBBABAABBB
R	heavy	Homo.sapiens	Hu_IGHV3-23*01	97.3	Hu_IGHV3-23*01	0.0	H3	15	H3-15-*	-1	VGGYSNfYYYYTMDA
R	heavy	Homo.sapiens	Hu_IGHV3-23*01	97.3	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	16	RDNSKNTL	BBAAALBB
S	kappa	Homo.sapiens	Hu_IGKV3-11*01	91.3	Hu_IGKV3-11*01	63.6	L1	11	L1-11-*	-1	RATQSISTFLA	BBABBBAABBB
S	kappa	Homo.sapiens	Hu_IGKV3-11*01	91.3	Hu_IGKV3-11*01	75.0	L2	8	L2-8-1	25	YDASTRAS	BLLABBBB
S	kappa	Homo.sapiens	Hu_IGKV3-11*01	91.3	Hu_IGKV3-11*01	85.7	L3	10	L3-10-*	-1	QQRYNWpPYS	BBABEBBbBB
S	kappa	Homo.sapiens	Hu_IGKV3-11*01	91.3	Hu_IGKV3-11*01	83.3	L4	6	L4-6-2	15	RSGTDF	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022