PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7CAI

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	kappa	Homo.sapiens	Hu_IGKV6D-21*02	89.7	Hu_IGKV6D-21*02	81.8	L1	11	L1-11-*	-1	RASQSISSNLH	BBBEBBBABBB
D	kappa	Homo.sapiens	Hu_IGKV6D-21*02	89.7	Hu_IGKV6D-21*02	100.0	L2	8	L2-8-1	19	KYASQSIS	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV6D-21*02	89.7	Hu_IGKV6D-21*02	28.6	L3	9	L3-9-*	-1	QQTNFWPYI	BBBELEBBB
D	kappa	Homo.sapiens	Hu_IGKV6D-21*02	89.7	Hu_IGKV6D-21*02	100.0	L4	6	L4-6-2	23	GSGTDF	BBEABB
E	heavy	Homo.sapiens	Hu_IGHV1-69-2*01	86.3	Hu_IGHV1-69-2*01	69.2	H1	13	H1-13-1	17	KVSGYSFSNYYIH	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV1-69-2*01	86.3	Hu_IGHV1-69-2*01	40.0	H2	10	H2-10-*	-1	YIDPFNGGTS	BBBAABABBB
E	heavy	Homo.sapiens	Hu_IGHV1-69-2*01	86.3	Hu_IGHV1-69-2*01	50.0	H3	13	H3-13-*	-1	ARSEYDPYYVMDY	BBBBABABBBBAB
E	heavy	Homo.sapiens	Hu_IGHV1-69-2*01	86.3	Hu_IGHV1-69-2*01	100.0	H4	8	H4-8-1	22	ADTSTDTA	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV6D-21*02	89.7	Hu_IGKV6D-21*02	81.8	L1	11	L1-11-*	-1	RASQSISSNLH	BBBEBBBABBB
F	kappa	Homo.sapiens	Hu_IGKV6D-21*02	89.7	Hu_IGKV6D-21*02	100.0	L2	8	L2-8-1	19	KYASQSIS	BLLABBBB
F	kappa	Homo.sapiens	Hu_IGKV6D-21*02	89.7	Hu_IGKV6D-21*02	28.6	L3	9	L3-9-*	-1	QQTNFWPYI	BBBELEBBB
F	kappa	Homo.sapiens	Hu_IGKV6D-21*02	89.7	Hu_IGKV6D-21*02	100.0	L4	6	L4-6-2	23	GSGTDF	BBEABB
G	heavy	Homo.sapiens	Hu_IGHV1-69-2*01	86.3	Hu_IGHV1-69-2*01	69.2	H1	13	H1-13-1	17	KVSGYSFSNYYIH	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV1-69-2*01	86.3	Hu_IGHV1-69-2*01	40.0	H2	10	H2-10-*	-1	YIDPFNGGTS	BBBAABABBB
G	heavy	Homo.sapiens	Hu_IGHV1-69-2*01	86.3	Hu_IGHV1-69-2*01	50.0	H3	13	H3-13-*	-1	ARSEYDPYYVMDY	BBBBABABBBBAB
G	heavy	Homo.sapiens	Hu_IGHV1-69-2*01	86.3	Hu_IGHV1-69-2*01	100.0	H4	8	H4-8-1	22	ADTSTDTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022