PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7C94

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV8-24*01	97.1	Mo_IGKV8-24*01	100.0	L1	17	L1-17-1	9	KSSQSLlnssnqKNYLA	BBABBABBAAALBBBBB
A	kappa	Mus.musculus	Mo_IGKV8-24*01	97.1	Mo_IGKV8-24*01	100.0	L2	8	L2-8-1	6	YFASTRES	BLEABBBB
A	kappa	Mus.musculus	Mo_IGKV8-24*01	97.1	Mo_IGKV8-24*01	85.7	L3	9	L3-9-cis7-1	11	QQYYSTPPT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV8-24*01	97.1	Mo_IGKV8-24*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB
B	heavy	Mus.musculus	Mo_IGHV5-9-3*01	97.3	Mo_IGHV5-9-3*01	84.6	H1	13	H1-13-1	9	AASGFTFTRYAMS	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV5-9-3*01	97.3	Mo_IGHV5-9-3*01	90.0	H2	10	H2-10-2	10	TISNGGSYTY	BBBAALABBB
B	heavy	Mus.musculus	Mo_IGHV5-9-3*01	97.3	Mo_IGHV5-9-3*01	100.0	H3	15	H3-15-*	-1	ARREGGQaGPAWFVY
B	heavy	Mus.musculus	Mo_IGHV5-9-3*01	97.3	Mo_IGHV5-9-3*01	100.0	H4	8	H4-8-1	10	RDNAKNTL	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV8-24*01	97.1	Mo_IGKV8-24*01	100.0	L1	17	L1-17-1	13	KSSQSLlnssnqKNYLA	BBABBABBAAALBBBBB
D	kappa	Mus.musculus	Mo_IGKV8-24*01	97.1	Mo_IGKV8-24*01	100.0	L2	8	L2-8-1	10	YFASTRES	BLEABBBB
D	kappa	Mus.musculus	Mo_IGKV8-24*01	97.1	Mo_IGKV8-24*01	85.7	L3	9	L3-9-cis7-1	9	QQYYSTPPT	BBAABBbBB
D	kappa	Mus.musculus	Mo_IGKV8-24*01	97.1	Mo_IGKV8-24*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
E	heavy	Mus.musculus	Mo_IGHV5-9-3*01	97.3	Mo_IGHV5-9-3*01	84.6	H1	13	H1-13-1	12	AASGFTFTRYAMS	BBBLBBAAABBBB
E	heavy	Mus.musculus	Mo_IGHV5-9-3*01	97.3	Mo_IGHV5-9-3*01	90.0	H2	10	H2-10-2	12	TISNGGSYTY	BBBAALABBB
E	heavy	Mus.musculus	Mo_IGHV5-9-3*01	97.3	Mo_IGHV5-9-3*01	100.0	H3	15	H3-15-*	-1	ARREGGQaGPAWFVY
E	heavy	Mus.musculus	Mo_IGHV5-9-3*01	97.3	Mo_IGHV5-9-3*01	100.0	H4	8	H4-8-1	11	RDNAKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022