PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7C88

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Hu_IGHV4-31*11	88.7	Mo_IGHV3-8*02	76.9	H1	13	H1-13-*	-1	TVSGDSITRGYWN	BBBEAAAABABBB
A	heavy	Mus.musculus	Hu_IGHV4-31*11	88.7	Mo_IGHV3-8*02	88.9	H2	9	H2-9-1	10	YISYTGSTY	BBBAALBBB
A	heavy	Mus.musculus	Hu_IGHV4-31*11	88.7	Hu_IGHV4-31*11	50.0	H3	12	H3-12-*	-1	ATSTGWLDPVDY	BBBABABBBBAB
A	heavy	Mus.musculus	Hu_IGHV4-31*11	88.7	Hu_IGHV4-31*11	75.0	H4	8	H4-8-1	10	RDTSKNQY	BBAAALBB
B	kappa	Mus.musculus	Hu_IGKV4-1*01	95.7	Mo_IGKV6-15*01	81.8	L1	11	L1-11-*	-1	KASQNVDTSVA	BBABBAAABBB
B	kappa	Mus.musculus	Hu_IGKV4-1*01	95.7	Mo_IGKV6-15*01	87.5	L2	8	L2-8-1	11	YSASFRYS	BLLABBBB
B	kappa	Mus.musculus	Hu_IGKV4-1*01	95.7	Hu_IGKV4-1*01	71.4	L3	9	L3-9-cis7-1	9	QQYYGYPFT	BBAABBbBB
B	kappa	Mus.musculus	Hu_IGKV4-1*01	95.7	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
H	heavy	Mus.musculus	Hu_IGHV4-31*11	88.7	Mo_IGHV3-8*02	76.9	H1	13	H1-13-*	-1	TVSGDSITRGYWN	BBBEAAAABABBB
H	heavy	Mus.musculus	Hu_IGHV4-31*11	88.7	Mo_IGHV3-8*02	88.9	H2	9	H2-9-1	8	YISYTGSTY	BBBAALBBB
H	heavy	Mus.musculus	Hu_IGHV4-31*11	88.7	Hu_IGHV4-31*11	50.0	H3	12	H3-12-*	-1	ATSTGWLDPVDY	BBBABAABBBAB
H	heavy	Mus.musculus	Hu_IGHV4-31*11	88.7	Hu_IGHV4-31*11	75.0	H4	8	H4-8-1	13	RDTSKNQY	BBAAALBB
L	kappa	Mus.musculus	Hu_IGKV4-1*01	95.7	Mo_IGKV6-15*01	81.8	L1	11	L1-11-*	-1	KASQNVDTSVA	BBABBAAABBB
L	kappa	Mus.musculus	Hu_IGKV4-1*01	95.7	Mo_IGKV6-15*01	87.5	L2	8	L2-8-1	12	YSASFRYS	BLLABBBB
L	kappa	Mus.musculus	Hu_IGKV4-1*01	95.7	Hu_IGKV4-1*01	71.4	L3	9	L3-9-cis7-1	9	QQYYGYPFT	BBAABBbBB
L	kappa	Mus.musculus	Hu_IGKV4-1*01	95.7	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022