PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7C4S

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-23*01	95.8	Mo_IGHV1-23*01	100.0	H1	13	H1-13-1	8	KASGYTFTDYEMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-23*01	95.8	Mo_IGHV1-23*01	90.0	H2	10	H2-10-*	-1	AIDPETGGTA	BBBABLBBBB
H	heavy	Mus.musculus	Mo_IGHV1-23*01	95.8	Mo_IGHV1-23*01	50.0	H3	12	H3-12-*	-1	TIPYYSNLRFAY	BBBBLBAABBAB
H	heavy	Mus.musculus	Mo_IGHV1-23*01	95.8	Mo_IGHV1-23*01	100.0	H4	8	H4-8-1	11	ADKSSSTA	BBAAALBB
J	heavy	Mus.musculus	Mo_IGHV1-23*01	95.8	Mo_IGHV1-23*01	100.0	H1	13	H1-13-1	9	KASGYTFTDYEMH	BBBLBBAAABBBB
J	heavy	Mus.musculus	Mo_IGHV1-23*01	95.8	Mo_IGHV1-23*01	90.0	H2	10	H2-10-*	-1	AIDPETGGTA	BBBABLBBBB
J	heavy	Mus.musculus	Mo_IGHV1-23*01	95.8	Mo_IGHV1-23*01	50.0	H3	12	H3-12-*	-1	TIPYYSNLRFAY	BBBBLBAABBAB
J	heavy	Mus.musculus	Mo_IGHV1-23*01	95.8	Mo_IGHV1-23*01	100.0	H4	8	H4-8-1	11	ADKSSSTA	BBAAALBB
K	kappa	Mus.musculus	Mo_IGKV6-20*01	95.7	Mo_IGKV6-20*01	81.8	L1	11	L1-11-1	23	KASENVGIFVS	BBABBAEAABB
K	kappa	Mus.musculus	Mo_IGKV6-20*01	95.7	Mo_IGKV6-20*01	100.0	L2	8	L2-8-4	22	YGASNRYT	BEABBBBB
K	kappa	Mus.musculus	Mo_IGKV6-20*01	95.7	Mo_IGKV6-20*01	85.7	L3	9	L3-9-cis7-*	-1	GQSYNYPLT	BALABBbBB
K	kappa	Mus.musculus	Mo_IGKV6-20*01	95.7	Mo_IGKV6-20*01	100.0	L4	6	L4-6-1	19	GSATDF	EBEABB
L	kappa	Mus.musculus	Mo_IGKV6-20*01	95.7	Mo_IGKV6-20*01	81.8	L1	11	L1-11-1	23	KASENVGIFVS	BBABBAEAABB
L	kappa	Mus.musculus	Mo_IGKV6-20*01	95.7	Mo_IGKV6-20*01	100.0	L2	8	L2-8-4	22	YGASNRYT	BEABBBBB
L	kappa	Mus.musculus	Mo_IGKV6-20*01	95.7	Mo_IGKV6-20*01	85.7	L3	9	L3-9-cis7-*	-1	GQSYNYPLT	BALABBbBB
L	kappa	Mus.musculus	Mo_IGKV6-20*01	95.7	Mo_IGKV6-20*01	100.0	L4	6	L4-6-1	19	GSATDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022