PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7BXA

#CDRs = 8; #Clusters = 11.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV4-61*08	97.3	Mo_IGHV2-9*02	100.0	H1	13	H1-13-1	18	TVSGFSLTSYGVH	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV4-61*08	97.3	Mo_IGHV2-9*02	77.8	H2	9	H2-9-1	17	VIYADGSTN	BBBAALBBB
B	heavy	Homo.sapiens	Hu_IGHV4-61*08	97.3	Hu_IGHV4-61*08	100.0	H3	12	H3-12-*	-1	ARAYGNYWYIDV	BBBBEABBBBAB
B	heavy	Homo.sapiens	Hu_IGHV4-61*08	97.3	Hu_IGHV4-61*08	75.0	H4	8	H4-8-1	15	KDTSKNQV	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Mo_IGKV6-32*01	81.8	L1	11	L1-11-*	-1	KSSESVSNDVA	BBABBAAABBB
C	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Mo_IGKV6-32*01	50.0	L2	8	L2-8-1	20	NYAFHRFT	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	57.1	L3	9	L3-9-cis7-*	-1	HQAYSSPYT	BBAABBaLB
C	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	83.3	L4	6	L4-6-3	41	GYGTDF	EABABB
H	heavy	Homo.sapiens	Hu_IGHV4-61*08	97.3	Mo_IGHV2-9*02	100.0	H1	13	H1-13-1	14	TVSGFSLTSYGVH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-61*08	97.3	Mo_IGHV2-9*02	77.8	H2	9	H2-9-*	-1	VIYADGSTN	BBBAAEBBB
H	heavy	Homo.sapiens	Hu_IGHV4-61*08	97.3	Hu_IGHV4-61*08	100.0	H3	12	H3-12-*	-1	ARAYGNYWYIDV	BBBBEABBBBAB
H	heavy	Homo.sapiens	Hu_IGHV4-61*08	97.3	Hu_IGHV4-61*08	75.0	H4	8	H4-8-1	12	KDTSKNQV	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Mo_IGKV6-32*01	81.8	L1	11	L1-11-*	-1	KSSESVSNDVA	BBABBAAABBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Mo_IGKV6-32*01	50.0	L2	8	L2-8-1	19	NYAFHRFT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	57.1	L3	9	L3-9-cis7-1	17	HQAYSSPYT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	83.3	L4	6	L4-6-1	20	GYGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022