PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7BUE

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence
G	heavy	Homo.sapiens	Hu_IGHV1-46*01	90.4	Hu_IGHV1-46*01	84.6	H1	13	H1-13-*	-1	KASGYTFTSNYIH
G	heavy	Homo.sapiens	Hu_IGHV1-46*01	90.4	Hu_IGHV1-46*01	70.0	H2	10	H2-10-*	-1	VINPRGGSTA
G	heavy	Homo.sapiens	Hu_IGHV1-46*01	90.4	Hu_IGHV1-46*01	100.0	H3	25	H3-25-*	-1	ARGGRalfydsyttprDGGSWWFDP
G	heavy	Homo.sapiens	Hu_IGHV1-46*01	90.4	Hu_IGHV1-46*01	100.0	H4	8	H4-8-*	-1	RDTSTSTV
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	90.4	Hu_IGHV1-46*01	84.6	H1	13	H1-13-*	-1	KASGYTFTSNYIH
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	90.4	Hu_IGHV1-46*01	70.0	H2	10	H2-10-*	-1	VINPRGGSTA
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	90.4	Hu_IGHV1-46*01	100.0	H3	25	H3-25-*	-1	ARGGRalfydsyttprDGGSWWFDP
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	90.4	Hu_IGHV1-46*01	100.0	H4	8	H4-8-*	-1	RDTSTSTV
I	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	81.8	L1	11	L1-11-*	-1	QASQDIRKYLN
I	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	87.5	L2	8	L2-8-*	-1	YDASNLKT
I	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	71.4	L3	9	L3-9-*	-1	QQFDDlPIT
I	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L4	6	L4-6-*	-1	GSGTDF
J	heavy	Homo.sapiens	Hu_IGHV1-46*01	90.4	Hu_IGHV1-46*01	84.6	H1	13	H1-13-*	-1	KASGYTFTSNYIH
J	heavy	Homo.sapiens	Hu_IGHV1-46*01	90.4	Hu_IGHV1-46*01	70.0	H2	10	H2-10-*	-1	VINPRGGSTA
J	heavy	Homo.sapiens	Hu_IGHV1-46*01	90.4	Hu_IGHV1-46*01	100.0	H3	25	H3-25-*	-1	ARGGRalfydsyttprDGGSWWFDP
J	heavy	Homo.sapiens	Hu_IGHV1-46*01	90.4	Hu_IGHV1-46*01	100.0	H4	8	H4-8-*	-1	RDTSTSTV
K	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	81.8	L1	11	L1-11-*	-1	QASQDIRKYLN
K	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	87.5	L2	8	L2-8-*	-1	YDASNLKT
K	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	71.4	L3	9	L3-9-*	-1	QQFDDlPIT
K	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L4	6	L4-6-*	-1	GSGTDF
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	81.8	L1	11	L1-11-*	-1	QASQDIRKYLN
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	87.5	L2	8	L2-8-*	-1	YDASNLKT
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	71.4	L3	9	L3-9-*	-1	QQFDDlPIT
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L4	6	L4-6-*	-1	GSGTDF

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022