PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7BSD

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Mo_IGHV3-6*01	94.5	Mo_IGHV3-6*01	100.0	H1	14	H1-14-*	-1	SVTGYSITSgYYWN	BBBLBBAABLBBBB
A	heavy	Homo.sapiens	Mo_IGHV3-6*01	94.5	Mo_IGHV3-6*01	77.8	H2	9	H2-9-1	10	YISYDGRSN	BBBAALBBB
A	heavy	Homo.sapiens	Mo_IGHV3-6*01	94.5	Mo_IGHV3-6*01	50.0	H3	13	H3-13-*	-1	ASFYYYTSRPLVY	BBBBABBALBBAB
A	heavy	Homo.sapiens	Mo_IGHV3-6*01	94.5	Mo_IGHV3-6*01	100.0	H4	8	H4-8-1	8	RDTSKNQF	BBAAALBB
B	kappa	Homo.sapiens	Mo_IGKV3-1*01	98.6	Mo_IGKV3-1*01	86.7	L1	15	L1-15-1	9	RASESVEysgtSLMH	BBABBABBLLBBBBB
B	kappa	Homo.sapiens	Mo_IGKV3-1*01	98.6	Mo_IGKV3-1*01	100.0	L2	8	L2-8-1	11	YAASNVES	BLLABBBB
B	kappa	Homo.sapiens	Mo_IGKV3-1*01	98.6	Mo_IGKV3-1*01	100.0	L3	9	L3-9-cis7-1	6	QQSRKVPYT	BBAABBbBB
B	kappa	Homo.sapiens	Mo_IGKV3-1*01	98.6	Mo_IGKV3-1*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Mo_IGHV3-6*01	94.5	Mo_IGHV3-6*01	100.0	H1	14	H1-14-*	-1	SVTGYSITSgYYWN	BBBLBBAABEBBBB
H	heavy	Homo.sapiens	Mo_IGHV3-6*01	94.5	Mo_IGHV3-6*01	77.8	H2	9	H2-9-1	16	YISYDGRSN	BBBAALBBB
H	heavy	Homo.sapiens	Mo_IGHV3-6*01	94.5	Mo_IGHV3-6*01	50.0	H3	13	H3-13-*	-1	ASFYYYTSRPLVY	BBBBAABALBBAB
H	heavy	Homo.sapiens	Mo_IGHV3-6*01	94.5	Mo_IGHV3-6*01	100.0	H4	8	H4-8-1	9	RDTSKNQF	BBAAALBB
L	kappa	Homo.sapiens	Mo_IGKV3-1*01	98.6	Mo_IGKV3-1*01	86.7	L1	15	L1-15-1	8	RASESVEysgtSLMH	BBABBABBLLBBBBB
L	kappa	Homo.sapiens	Mo_IGKV3-1*01	98.6	Mo_IGKV3-1*01	100.0	L2	8	L2-8-1	11	YAASNVES	BLLABBBB
L	kappa	Homo.sapiens	Mo_IGKV3-1*01	98.6	Mo_IGKV3-1*01	100.0	L3	9	L3-9-cis7-1	5	QQSRKVPYT	BBAABBbBB
L	kappa	Homo.sapiens	Mo_IGKV3-1*01	98.6	Mo_IGKV3-1*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022