PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7BQ5

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV4-39*01	93.2	Hu_IGHV4-39*01	80.0	H1	15	H1-15-2	17	TVSGGSIStrDYYWG	BBBLEBABBAABBBB
C	heavy	Homo.sapiens	Hu_IGHV4-39*01	93.2	Hu_IGHV4-39*01	88.9	H2	9	H2-9-1	18	SIYYSGGTY	BBBAALBBB
C	heavy	Homo.sapiens	Hu_IGHV4-39*01	93.2	Hu_IGHV4-39*01	100.0	H3	10	H3-10-2	16	ARQWGNYFDH	BBBBLABBAB
C	heavy	Homo.sapiens	Hu_IGHV4-39*01	93.2	Hu_IGHV4-39*01	100.0	H4	8	H4-8-1	14	VDTSKNQF	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV1-9*01	98.6	Hu_IGKV1-9*01	81.8	L1	11	L1-11-1	13	RASQGIDTYLA	BBABBAEABBB
D	kappa	Homo.sapiens	Hu_IGKV1-9*01	98.6	Hu_IGKV1-9*01	87.5	L2	8	L2-8-1	16	YGASTLQS	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV1-9*01	98.6	Hu_IGKV1-9*01	71.4	L3	9	L3-9-1	10	QQLNNYHFT	BBBBLLBBB
D	kappa	Homo.sapiens	Hu_IGKV1-9*01	98.6	Hu_IGKV1-9*01	100.0	L4	6	L4-6-1	9	GSGTEF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	93.2	Hu_IGHV4-39*01	80.0	H1	15	H1-15-2	14	TVSGGSIStrDYYWG	BBBLBBABBAABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	93.2	Hu_IGHV4-39*01	88.9	H2	9	H2-9-1	18	SIYYSGGTY	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	93.2	Hu_IGHV4-39*01	100.0	H3	10	H3-10-*	-1	ARQWGNYFDH	BBBAAABBAB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	93.2	Hu_IGHV4-39*01	100.0	H4	8	H4-8-1	13	VDTSKNQF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	98.6	Hu_IGKV1-9*01	81.8	L1	11	L1-11-1	13	RASQGIDTYLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	98.6	Hu_IGKV1-9*01	87.5	L2	8	L2-8-1	15	YGASTLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	98.6	Hu_IGKV1-9*01	71.4	L3	9	L3-9-1	11	QQLNNYHFT	BBBBLLBBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	98.6	Hu_IGKV1-9*01	100.0	L4	6	L4-6-1	10	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022