PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7BEL

#CDRs = 8; #Clusters = 14.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	100.0	Hu_IGHV3-30-3*02	92.3	H1	13	H1-13-1	16	AASGFTFSTYAMH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	100.0	Hu_IGHV3-30-3*02	90.0	H2	10	H2-10-2	8	VLSYDGSNKY	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	100.0	Hu_IGHV3-30-3*02	100.0	H3	14	H3-14-*	-1	AKGGSYAYYYYMDV	BBBBAAABAABBAB
A	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	100.0	Hu_IGHV3-30-3*02	100.0	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L1	11	L1-11-1	8	QASQDISNYLN	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L2	8	L2-8-1	10	YDASNLET	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L3	9	L3-9-cis7-1	9	QQYDNlPLT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	100.0	Hu_IGHV3-30-3*02	92.3	H1	13	H1-13-1	16	AASGFTFSTYAMH	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	100.0	Hu_IGHV3-30-3*02	90.0	H2	10	H2-10-2	8	VLSYDGSNKY	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	100.0	Hu_IGHV3-30-3*02	100.0	H3	14	H3-14-*	-1	AKGGSYAYYYYMDV	BBBBAAABAABBAB
C	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	100.0	Hu_IGHV3-30-3*02	100.0	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L1	11	L1-11-1	7	QASQDISNYLN	BBABBAEABBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L2	8	L2-8-1	10	YDASNLET	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L3	9	L3-9-cis7-1	9	QQYDNlPLT	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	95.7	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
E	heavy	Homo.sapiens	Hu_IGHV4-61*02	94.5	Hu_IGHV4-61*02	86.7	H1	15	H1-15-*	-1	TVSGGSISsgSYNWT	BBBLEBABABBBBBB
E	heavy	Homo.sapiens	Hu_IGHV4-61*02	94.5	Hu_IGHV4-61*02	88.9	H2	9	H2-9-*	-1	RIYNSGSTN	BBBEALBBB
E	heavy	Homo.sapiens	Hu_IGHV4-61*02	94.5	Hu_IGHV4-61*02	100.0	H3	19	H3-19-*	-1	ARHCSGgtcypKYYYGMDV
E	heavy	Homo.sapiens	Hu_IGHV4-61*02	94.5	Hu_IGHV4-61*02	87.5	H4	8	H4-8-1	11	VDTSKNQL	BBAAALBB
F	lambda	Homo.sapiens	Hu_IGLV1-36*01	95.6	Hu_IGLV1-36*01	100.0	L1	13	L1-13-1	9	SGSSSNIGNNAVN	BBBAAAAAABBBB
F	lambda	Homo.sapiens	Hu_IGLV1-36*01	95.6	Hu_IGLV1-36*01	100.0	L2	8	L2-8-1	12	YYDDLLPS	BLEABBBB
F	lambda	Homo.sapiens	Hu_IGLV1-36*01	95.6	Hu_IGLV1-36*01	88.9	L3	11	L3-11-1	11	AAWDDSLNVVV	BBBBAAALBBB
F	lambda	Homo.sapiens	Hu_IGLV1-36*01	95.6	Hu_IGLV1-36*01	100.0	L4	6	L4-6-2	10	KSGTSA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV4-61*02	94.5	Hu_IGHV4-61*02	86.7	H1	15	H1-15-*	-1	TVSGGSISsgSYNWT	BBBLEBABABBBBBB
H	heavy	Homo.sapiens	Hu_IGHV4-61*02	94.5	Hu_IGHV4-61*02	88.9	H2	9	H2-9-*	-1	RIYNSGSTN	BBBEALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-61*02	94.5	Hu_IGHV4-61*02	100.0	H3	19	H3-19-*	-1	ARHCSGgtcypKYYYGMDV
H	heavy	Homo.sapiens	Hu_IGHV4-61*02	94.5	Hu_IGHV4-61*02	87.5	H4	8	H4-8-1	11	VDTSKNQL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV1-36*01	95.6	Hu_IGLV1-36*01	100.0	L1	13	L1-13-1	9	SGSSSNIGNNAVN	BBBAAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-36*01	95.6	Hu_IGLV1-36*01	100.0	L2	8	L2-8-1	12	YYDDLLPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-36*01	95.6	Hu_IGLV1-36*01	88.9	L3	11	L3-11-1	11	AAWDDSLNVVV	BBBBAAALBBB
L	lambda	Homo.sapiens	Hu_IGLV1-36*01	95.6	Hu_IGLV1-36*01	100.0	L4	6	L4-6-2	10	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022