PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7BEK

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	95.9	Hu_IGHV3-53*01	92.3	H1	13	H1-13-1	11	AASGVTVSSNYMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	95.9	Hu_IGHV3-53*01	66.7	H2	9	H2-9-1	8	IIYPGGSTF	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	95.9	Hu_IGHV3-53*01	100.0	H3	11	H3-11-*	-1	ARDLGSGDMDV	BBBALALBBAB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	95.9	Hu_IGHV3-53*01	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	97.1	Hu_IGKV1-9*01	100.0	L1	11	L1-11-1	7	RASQGISSYLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	97.1	Hu_IGKV1-9*01	87.5	L2	8	L2-8-1	18	QAASTLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	97.1	Hu_IGKV1-9*01	85.7	L3	9	L3-9-*	-1	QQLNSYRYT	BBBLBAALB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	97.1	Hu_IGKV1-9*01	100.0	L4	6	L4-6-1	8	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022