PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7AQL

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV14-3*02	90.4	Mo_IGHV14-3*02	92.3	H1	13	H1-13-1	14	TASGFNIKDTYIH	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV14-3*02	90.4	Mo_IGHV14-3*02	100.0	H2	10	H2-10-1	8	RIDPANGNTK	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV14-3*02	90.4	Mo_IGHV14-3*02	50.0	H3	12	H3-12-*	-1	VRGDYDYVYFDY	BBBABEAABBAB
A	heavy	Mus.musculus	Mo_IGHV14-3*02	90.4	Mo_IGHV14-3*02	100.0	H4	8	H4-8-1	8	ADTSSNTA	BBAAALBB
A	kappa	Mus.musculus	Mo_IGKV10-96*01	95.7	Mo_IGKV10-96*01	81.8	L1	11	L1-11-2	5	RASQDISNFLD	BBABBALLBBB
A	kappa	Mus.musculus	Mo_IGKV10-96*01	95.7	Mo_IGKV10-96*01	100.0	L2	8	L2-8-1	4	YYTSRLHS	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV10-96*01	95.7	Mo_IGKV10-96*01	85.7	L3	9	L3-9-cis7-1	16	QQGNTFPPT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV10-96*01	95.7	Mo_IGKV10-96*01	100.0	L4	6	L4-6-1	8	GSGTDY	EBEABB
B	heavy	Mus.musculus	Mo_IGHV14-3*02	90.4	Mo_IGHV14-3*02	92.3	H1	13	H1-13-1	16	TASGFNIKDTYIH	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV14-3*02	90.4	Mo_IGHV14-3*02	100.0	H2	10	H2-10-1	8	RIDPANGNTK	BBBAAALBBB
B	heavy	Mus.musculus	Mo_IGHV14-3*02	90.4	Mo_IGHV14-3*02	50.0	H3	12	H3-12-*	-1	VRGDYDYVYFDY	BBBAAEAABBAB
B	heavy	Mus.musculus	Mo_IGHV14-3*02	90.4	Mo_IGHV14-3*02	100.0	H4	8	H4-8-1	8	ADTSSNTA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV10-96*01	95.7	Mo_IGKV10-96*01	81.8	L1	11	L1-11-2	4	RASQDISNFLD	BBABBALLBBB
B	kappa	Mus.musculus	Mo_IGKV10-96*01	95.7	Mo_IGKV10-96*01	100.0	L2	8	L2-8-1	3	YYTSRLHS	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV10-96*01	95.7	Mo_IGKV10-96*01	85.7	L3	9	L3-9-cis7-1	10	QQGNTFPPT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV10-96*01	95.7	Mo_IGKV10-96*01	100.0	L4	6	L4-6-1	8	GSGTDY	EBEABB
C	heavy	Mus.musculus	Mo_IGHV14-3*02	90.4	Mo_IGHV14-3*02	92.3	H1	13	H1-13-1	15	TASGFNIKDTYIH	BBBLBBAAABBBB
C	heavy	Mus.musculus	Mo_IGHV14-3*02	90.4	Mo_IGHV14-3*02	100.0	H2	10	H2-10-1	8	RIDPANGNTK	BBBAAALBBB
C	heavy	Mus.musculus	Mo_IGHV14-3*02	90.4	Mo_IGHV14-3*02	50.0	H3	12	H3-12-*	-1	VRGDYDYVYFDY	BBBABEAABBAB
C	heavy	Mus.musculus	Mo_IGHV14-3*02	90.4	Mo_IGHV14-3*02	100.0	H4	8	H4-8-1	6	ADTSSNTA	BBAAALBB
C	kappa	Mus.musculus	Mo_IGKV10-96*01	95.7	Mo_IGKV10-96*01	81.8	L1	11	L1-11-2	5	RASQDISNFLD	BBABBALLBBB
C	kappa	Mus.musculus	Mo_IGKV10-96*01	95.7	Mo_IGKV10-96*01	100.0	L2	8	L2-8-1	4	YYTSRLHS	BLLABBBB
C	kappa	Mus.musculus	Mo_IGKV10-96*01	95.7	Mo_IGKV10-96*01	85.7	L3	9	L3-9-cis7-1	17	QQGNTFPPT	BBAABBbBB
C	kappa	Mus.musculus	Mo_IGKV10-96*01	95.7	Mo_IGKV10-96*01	100.0	L4	6	L4-6-1	7	GSGTDY	EBEABB
D	heavy	Mus.musculus	Mo_IGHV14-3*02	90.4	Mo_IGHV14-3*02	92.3	H1	13	H1-13-1	15	TASGFNIKDTYIH	BBBLBBAAABBBB
D	heavy	Mus.musculus	Mo_IGHV14-3*02	90.4	Mo_IGHV14-3*02	100.0	H2	10	H2-10-1	8	RIDPANGNTK	BBBAAALBBB
D	heavy	Mus.musculus	Mo_IGHV14-3*02	90.4	Mo_IGHV14-3*02	50.0	H3	12	H3-12-*	-1	VRGDYDYVYFDY	BBBABEAABBAB
D	heavy	Mus.musculus	Mo_IGHV14-3*02	90.4	Mo_IGHV14-3*02	100.0	H4	8	H4-8-1	6	ADTSSNTA	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV10-96*01	95.7	Mo_IGKV10-96*01	81.8	L1	11	L1-11-2	4	RASQDISNFLD	BBABBALLBBB
D	kappa	Mus.musculus	Mo_IGKV10-96*01	95.7	Mo_IGKV10-96*01	100.0	L2	8	L2-8-1	3	YYTSRLHS	BLLABBBB
D	kappa	Mus.musculus	Mo_IGKV10-96*01	95.7	Mo_IGKV10-96*01	85.7	L3	9	L3-9-cis7-1	10	QQGNTFPPT	BBAABBbBB
D	kappa	Mus.musculus	Mo_IGKV10-96*01	95.7	Mo_IGKV10-96*01	100.0	L4	6	L4-6-1	8	GSGTDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022