PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7AHU

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L1	12	L1-12-*	-1	RASQSVSsSYLA	BBBBBBEELBBB
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	62.5	L2	8	L2-8-4	18	YGQSSRTR	BEAABBBB
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	57.1	L3	10	L3-10-3	18	QQFGdSQLFT	BBBBAAAEBB
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	100.0	Hu_IGHV5-10-1*01	69.2	H1	13	H1-13-1	8	KGSGYSFSTSWIV	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	100.0	Hu_IGHV5-10-1*01	70.0	H2	10	H2-10-1	8	MIDPSDSFTS	BBBAAALBBB
B	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	100.0	Hu_IGHV5-10-1*01	100.0	H3	13	H3-13-*	-1	ARLHYYNSEEFDV	BBBBAAABABBAB
B	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	100.0	Hu_IGHV5-10-1*01	100.0	H4	8	H4-8-1	7	ADKSISTA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	100.0	Hu_IGHV5-10-1*01	69.2	H1	13	H1-13-1	7	KGSGYSFSTSWIV	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	100.0	Hu_IGHV5-10-1*01	70.0	H2	10	H2-10-1	9	MIDPSDSFTS	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	100.0	Hu_IGHV5-10-1*01	100.0	H3	13	H3-13-*	-1	ARLHYYNSEEFDV	BBBBAAABABBAB
H	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	100.0	Hu_IGHV5-10-1*01	100.0	H4	8	H4-8-1	8	ADKSISTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L1	12	L1-12-*	-1	RASQSVSsSYLA	BBBBBAAEABBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	62.5	L2	8	L2-8-4	18	YGQSSRTR	BEAABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	57.1	L3	10	L3-10-3	18	QQFGdSQLFT	BBBBAAAEBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022