PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6ZVF

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Rattus.norvegicus	Ra_IGHV9-4*01	98.6	Ra_IGHV9-4*01	92.3	H1	13	H1-13-1	8	KASGYTFTDYAIH	BBBLBBAAABBBB
H	heavy	Rattus.norvegicus	Ra_IGHV9-4*01	98.6	Ra_IGHV9-4*01	90.0	H2	10	H2-10-1	14	WINTYTGKPI	BBBAAALBBB
H	heavy	Rattus.norvegicus	Ra_IGHV9-4*01	98.6	Ra_IGHV9-4*01	100.0	H3	11	H3-11-1	16	ARGTMMASLDY	BBBBAALBBAB
H	heavy	Rattus.norvegicus	Ra_IGHV9-4*01	98.6	Ra_IGHV9-4*01	100.0	H4	8	H4-8-1	10	LEASASTA	BBAAALBB
L	kappa	Rattus.norvegicus	Ra_IGKV1S8*01	98.6	Ra_IGKV1S8*01	93.8	L1	16	L1-16-1	6	KSSQSLvhsdgKTYLS	BBABBABBAALBBBBB
L	kappa	Rattus.norvegicus	Ra_IGKV1S8*01	98.6	Ra_IGKV1S8*01	100.0	L2	8	L2-8-1	6	YLVSKLDS	BLLABBBB
L	kappa	Rattus.norvegicus	Ra_IGKV1S8*01	98.6	Ra_IGKV1S8*01	100.0	L3	9	L3-9-cis7-1	11	WQATHFPLT	BBAABBbBB
L	kappa	Rattus.norvegicus	Ra_IGKV1S8*01	98.6	Ra_IGKV1S8*01	100.0	L4	6	L4-6-3	18	GSETEF	EBAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022