PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6Z7Z

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV19-93*01	97.1	Mo_IGKV19-93*01	90.9	L1	11	L1-11-2	6	KASQDINKYLA	BBABBALLBBB
A	kappa	Mus.musculus	Mo_IGKV19-93*01	97.1	Mo_IGKV19-93*01	100.0	L2	8	L2-8-1	8	HYTSTLQP	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV19-93*01	97.1	Mo_IGKV19-93*01	85.7	L3	8	L3-8-1	7	LQYDSLLS	BBAABEBB
A	kappa	Mus.musculus	Mo_IGKV19-93*01	97.1	Mo_IGKV19-93*01	100.0	L4	6	L4-6-1	10	GSGRDY	EBEABB
B	heavy	Mus.musculus	Mo_IGHV5-12-1*01	97.3	Mo_IGHV5-12-1*01	84.6	H1	13	H1-13-1	9	TASGFAFSDYDMS	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV5-12-1*01	97.3	Mo_IGHV5-12-1*01	70.0	H2	10	H2-10-2	10	FISNGGYSTY	BBBAALABBB
B	heavy	Mus.musculus	Mo_IGHV5-12-1*01	97.3	Mo_IGHV5-12-1*01	100.0	H3	10	H3-10-*	-1	ARQGLRYFDY	BBBABABBAB
B	heavy	Mus.musculus	Mo_IGHV5-12-1*01	97.3	Mo_IGHV5-12-1*01	87.5	H4	8	H4-8-1	8	RDNAENTL	BBAAALBB
C	kappa	Mus.musculus	Mo_IGKV19-93*01	97.1	Mo_IGKV19-93*01	90.9	L1	11	L1-11-2	7	KASQDINKYLA	BBABBALLBBB
C	kappa	Mus.musculus	Mo_IGKV19-93*01	97.1	Mo_IGKV19-93*01	100.0	L2	8	L2-8-1	7	HYTSTLQP	BLLABBBB
C	kappa	Mus.musculus	Mo_IGKV19-93*01	97.1	Mo_IGKV19-93*01	85.7	L3	8	L3-8-1	8	LQYDSLLS	BBAABEBB
C	kappa	Mus.musculus	Mo_IGKV19-93*01	97.1	Mo_IGKV19-93*01	100.0	L4	6	L4-6-1	10	GSGRDY	EBEABB
D	heavy	Mus.musculus	Mo_IGHV5-12-1*01	97.3	Mo_IGHV5-12-1*01	84.6	H1	13	H1-13-1	9	TASGFAFSDYDMS	BBBLBBAAABBBB
D	heavy	Mus.musculus	Mo_IGHV5-12-1*01	97.3	Mo_IGHV5-12-1*01	70.0	H2	10	H2-10-2	10	FISNGGYSTY	BBBAALABBB
D	heavy	Mus.musculus	Mo_IGHV5-12-1*01	97.3	Mo_IGHV5-12-1*01	100.0	H3	10	H3-10-*	-1	ARQGLRYFDY	BBBABABBAB
D	heavy	Mus.musculus	Mo_IGHV5-12-1*01	97.3	Mo_IGHV5-12-1*01	87.5	H4	8	H4-8-1	8	RDNAENTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022