PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6YYE

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV3-23*05	100.0	Hu_IGHV3-23*05	69.2	H1	13	H1-13-1	16	AASGFTFYSSYMG	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*05	100.0	Hu_IGHV3-23*05	80.0	H2	10	H2-10-2	21	YISSSGSSTY	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*05	100.0	Hu_IGHV3-23*05	50.0	H3	15	H3-15-*	-1	ARVGGYySWGNGIDY
C	heavy	Homo.sapiens	Hu_IGHV3-23*05	100.0	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	10	RDNSKNTL	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L1	11	L1-11-1	15	RASQSISSYLN	BBABBAEABBB
C	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L2	8	L2-8-1	18	YAASSLQS	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	28.6	L3	10	L3-10-*	-1	QQYGVyyPFT	BBBLABABBB
C	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
D	heavy	Homo.sapiens	Hu_IGHV3-23*05	100.0	Hu_IGHV3-23*05	69.2	H1	13	H1-13-1	16	AASGFTFYSSYMG	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-23*05	100.0	Hu_IGHV3-23*05	80.0	H2	10	H2-10-2	13	YISSSGSSTY	BBBAALABBB
D	heavy	Homo.sapiens	Hu_IGHV3-23*05	100.0	Hu_IGHV3-23*05	50.0	H3	15	H3-15-*	-1	ARVGGYySWGNGIDY
D	heavy	Homo.sapiens	Hu_IGHV3-23*05	100.0	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	9	RDNSKNTL	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L1	11	L1-11-1	13	RASQSISSYLN	BBABBAEABBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L2	8	L2-8-1	9	YAASSLQS	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	28.6	L3	10	L3-10-*	-1	QQYGVyyPFT	BBBLABABBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022