PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6YXL

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
HHH	heavy	Homo.sapiens	Hu_IGHV1-18*02	82.6	None	-1.0	H1	12	H1-12-*	-1	KASGFVTDYFIQ
HHH	heavy	Homo.sapiens	Hu_IGHV1-18*02	82.6	Hu_IGHV1-18*02	50.0	H2	10	H2-10-1	11	WINPHNGETD	BBBAAALBBB
HHH	heavy	Homo.sapiens	Hu_IGHV1-18*02	82.6	Hu_IGHV1-18*02	0.0	H3	15	H3-15-*	-1	GRSGRTDaRRAPVSY
HHH	heavy	Homo.sapiens	Hu_IGHV1-18*02	82.6	Hu_IGHV1-18*02	75.0	H4	8	H4-8-1	10	CDTSTNTA	BBAAALBB
LLL	kappa	Homo.sapiens	Hu_IGKV3-20*02	91.3	Hu_IGKV3-20*02	66.7	L1	12	L1-12-2	8	RASQTVRgNYLA	BBABBBBLLBBB
LLL	kappa	Homo.sapiens	Hu_IGKV3-20*02	91.3	Hu_IGKV3-20*02	75.0	L2	8	L2-8-1	5	YLASNRAT	BLLABBBB
LLL	kappa	Homo.sapiens	Hu_IGKV3-20*02	91.3	Hu_IGKV3-20*02	100.0	L3	9	L3-9-cis7-1	21	QQYVNTPET	BBAABBbBB
LLL	kappa	Homo.sapiens	Hu_IGKV3-20*02	91.3	Hu_IGKV3-20*02	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022