PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6YWC

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Mo_IGHV8-12*01	98.6	Mo_IGHV8-12*01	100.0	H1	15	H1-15-1	7	SFSGFSLSTSGMgvS	BBBLBBAABBLBBBB
A	heavy	Homo.sapiens	Mo_IGHV8-12*01	98.6	Mo_IGHV8-12*01	100.0	H2	9	H2-9-1	10	HIYWDDDKR	BBBAALBBB
A	heavy	Homo.sapiens	Mo_IGHV8-12*01	98.6	Mo_IGHV8-12*01	66.7	H3	12	H3-12-*	-1	ARLYGFTYGFAY	BBBBEAAAEBAB
A	heavy	Homo.sapiens	Mo_IGHV8-12*01	98.6	Mo_IGHV8-12*01	100.0	H4	8	H4-8-1	10	KDTSRNQV	BBAAALBB
B	kappa	Homo.sapiens	Mo_IGKV3-3*01	98.6	Mo_IGKV3-3*01	100.0	L1	15	L1-15-1	8	RASQSVDyngiSYMH	BBABBABBLLBBBBB
B	kappa	Homo.sapiens	Mo_IGKV3-3*01	98.6	Mo_IGKV3-3*01	87.5	L2	8	L2-8-1	7	YAASNPES	BLLABBBB
B	kappa	Homo.sapiens	Mo_IGKV3-3*01	98.6	Mo_IGKV3-3*01	85.7	L3	9	L3-9-cis7-1	18	QQIIEDPWT	BBBABBbBB
B	kappa	Homo.sapiens	Mo_IGKV3-3*01	98.6	Mo_IGKV3-3*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB
D	heavy	Homo.sapiens	Mo_IGHV8-12*01	98.6	Mo_IGHV8-12*01	100.0	H1	15	H1-15-1	7	SFSGFSLSTSGMgvS	BBBLBBAABBLBBBB
D	heavy	Homo.sapiens	Mo_IGHV8-12*01	98.6	Mo_IGHV8-12*01	100.0	H2	9	H2-9-1	10	HIYWDDDKR	BBBAALBBB
D	heavy	Homo.sapiens	Mo_IGHV8-12*01	98.6	Mo_IGHV8-12*01	66.7	H3	12	H3-12-*	-1	ARLYGFTYGFAY	BBBBEAAAEBAB
D	heavy	Homo.sapiens	Mo_IGHV8-12*01	98.6	Mo_IGHV8-12*01	100.0	H4	8	H4-8-1	9	KDTSRNQV	BBAAALBB
E	kappa	Homo.sapiens	Mo_IGKV3-3*01	98.6	Mo_IGKV3-3*01	100.0	L1	15	L1-15-1	9	RASQSVDyngiSYMH	BBABBABBLLBBBBB
E	kappa	Homo.sapiens	Mo_IGKV3-3*01	98.6	Mo_IGKV3-3*01	87.5	L2	8	L2-8-1	8	YAASNPES	BLLABBBB
E	kappa	Homo.sapiens	Mo_IGKV3-3*01	98.6	Mo_IGKV3-3*01	85.7	L3	9	L3-9-cis7-1	18	QQIIEDPWT	BBBABBbBB
E	kappa	Homo.sapiens	Mo_IGKV3-3*01	98.6	Mo_IGKV3-3*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022