PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6YSQ

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	heavy	Escherichia.coli	Al_IGHV3-3*01_VHH	87.7	Al_IGHV3-3*01_VHH	92.3	H1	13	H1-13-3	18	AASGRTFSRYAMG	BBBEAAAAABBBB
G	heavy	Escherichia.coli	Al_IGHV3-3*01_VHH	87.7	Al_IGHV3-3*01_VHH	90.0	H2	10	H2-10-2	15	AINWSGGSTY	BBBAALABBB
G	heavy	Escherichia.coli	Al_IGHV3-3*01_VHH	87.7	Al_IGHV3-3*01_VHH	100.0	H3	17	H3-17-*	-1	AAGGpevEITRANEYDY
G	heavy	Escherichia.coli	Al_IGHV3-3*01_VHH	87.7	Al_IGHV3-3*01_VHH	75.0	H4	8	H4-8-1	11	RDNAKNML	BBAAALBB
H	heavy	Escherichia.coli	Al_IGHV3-3*01_VHH	87.7	Al_IGHV3-3*01_VHH	92.3	H1	13	H1-13-3	18	AASGRTFSRYAMG	BBBEAAAAABBBB
H	heavy	Escherichia.coli	Al_IGHV3-3*01_VHH	87.7	Al_IGHV3-3*01_VHH	90.0	H2	10	H2-10-2	15	AINWSGGSTY	BBBAALABBB
H	heavy	Escherichia.coli	Al_IGHV3-3*01_VHH	87.7	Al_IGHV3-3*01_VHH	100.0	H3	17	H3-17-*	-1	AAGGpevEITRANEYDY
H	heavy	Escherichia.coli	Al_IGHV3-3*01_VHH	87.7	Al_IGHV3-3*01_VHH	75.0	H4	8	H4-8-1	11	RDNAKNML	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022