PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6YOR

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV5-51*01	93.2	Hu_IGHV5-51*01	76.9	H1	13	H1-13-*	-1	KGSGYGFITYWIG	BBBEBLAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV5-51*01	93.2	Hu_IGHV5-51*01	90.0	H2	10	H2-10-1	12	IIYPGDSETR	BBBAAALBBB
B	heavy	Homo.sapiens	Hu_IGHV5-51*01	93.2	Hu_IGHV5-51*01	50.0	H3	12	H3-12-*	-1	AGGSGISTPMDV	BBBBEBLBBBAB
B	heavy	Homo.sapiens	Hu_IGHV5-51*01	93.2	Hu_IGHV5-51*01	87.5	H4	8	H4-8-1	11	ADKSINTA	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV4-1*01	97.1	Hu_IGKV4-1*01	94.1	L1	17	L1-17-*	-1	KSSQSVlyssinKNYLA	BBABBABBAABBBBBBB
C	kappa	Homo.sapiens	Hu_IGKV4-1*01	97.1	Hu_IGKV4-1*01	100.0	L2	8	L2-8-1	11	YWASTRES	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV4-1*01	97.1	Hu_IGKV4-1*01	100.0	L3	9	L3-9-cis7-1	9	QQYYSTPYT	BBAABBbBB
C	kappa	Homo.sapiens	Hu_IGKV4-1*01	97.1	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	3	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	93.2	Hu_IGHV5-51*01	76.9	H1	13	H1-13-*	-1	KGSGYGFITYWIG	BBBEBLAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	93.2	Hu_IGHV5-51*01	90.0	H2	10	H2-10-1	12	IIYPGDSETR	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	93.2	Hu_IGHV5-51*01	50.0	H3	12	H3-12-*	-1	AGGSGISTPMDV	BBBBEBLBBBAB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	93.2	Hu_IGHV5-51*01	87.5	H4	8	H4-8-1	11	ADKSINTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	97.1	Hu_IGKV4-1*01	94.1	L1	17	L1-17-*	-1	KSSQSVlyssinKNYLA	BBABBABBAABBBBBBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	97.1	Hu_IGKV4-1*01	100.0	L2	8	L2-8-1	11	YWASTRES	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	97.1	Hu_IGKV4-1*01	100.0	L3	9	L3-9-cis7-1	9	QQYYSTPYT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	97.1	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	3	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022