PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6XXV

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-74*03	90.4	Hu_IGHV3-74*03	84.6	H1	13	H1-13-1	13	AASGFTFSPYWMY	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-74*03	90.4	Hu_IGHV3-74*03	50.0	H2	10	H2-10-*	-1	VINSGGGITY	BBBBLBABBB
A	heavy	Homo.sapiens	Hu_IGHV3-74*03	90.4	Hu_IGHV3-74*03	50.0	H3	19	H3-19-*	-1	VRDRTYYsgvyyTEDGLDS
A	heavy	Homo.sapiens	Hu_IGHV3-74*03	90.4	Hu_IGHV3-74*03	87.5	H4	8	H4-8-1	21	RENAKNTL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-17*03	92.8	Hu_IGKV1-17*03	72.7	L1	11	L1-11-1	10	RAGQGVSNYLS	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-17*03	92.8	Hu_IGKV1-17*03	87.5	L2	8	L2-8-1	8	YKASSLQS	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-17*03	92.8	Hu_IGKV1-17*03	71.4	L3	9	L3-9-cis7-1	10	LQHNIHPYS	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV1-17*03	92.8	Hu_IGKV1-17*03	100.0	L4	6	L4-6-1	15	GSGTEF	EBEABB
D	heavy	Homo.sapiens	Hu_IGHV3-74*03	90.4	Hu_IGHV3-74*03	84.6	H1	13	H1-13-1	13	AASGFTFSPYWMY	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-74*03	90.4	Hu_IGHV3-74*03	50.0	H2	10	H2-10-*	-1	VINSGGGITY	BBBBLBABBB
D	heavy	Homo.sapiens	Hu_IGHV3-74*03	90.4	Hu_IGHV3-74*03	50.0	H3	19	H3-19-*	-1	VRDRTYYsgvyyTEDGLDS
D	heavy	Homo.sapiens	Hu_IGHV3-74*03	90.4	Hu_IGHV3-74*03	87.5	H4	8	H4-8-1	6	RENAKNTL	BBAAALBB
E	kappa	Homo.sapiens	Hu_IGKV1-17*03	92.8	Hu_IGKV1-17*03	72.7	L1	11	L1-11-1	6	RAGQGVSNYLS	BBABBAEABBB
E	kappa	Homo.sapiens	Hu_IGKV1-17*03	92.8	Hu_IGKV1-17*03	87.5	L2	8	L2-8-1	4	YKASSLQS	BLLABBBB
E	kappa	Homo.sapiens	Hu_IGKV1-17*03	92.8	Hu_IGKV1-17*03	71.4	L3	9	L3-9-cis7-1	13	LQHNIHPYS	BBAABBbBB
E	kappa	Homo.sapiens	Hu_IGKV1-17*03	92.8	Hu_IGKV1-17*03	100.0	L4	6	L4-6-1	8	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022