PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6XXN

#CDRs = 4; #Clusters = 5.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	93.2	Ca_IGHV1S45*01_VHH	46.2	H1	13	H1-13-*	-1	TAPGYTDSNYYMS	BBAAAAABBBBBB
A	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	93.2	Ca_IGHV1S45*01_VHH	50.0	H2	10	H2-10-1	16	GVNTGRGSTS	BBBAAALBBB
A	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	93.2	Ca_IGHV1S45*01_VHH	0.0	H3	20	H3-20-*	-1	AVAACHfcdslpKTQDEYIL
A	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	93.2	Ca_IGHV1S45*01_VHH	87.5	H4	8	H4-8-*	-1	QDNAKNTM	BBABAABB
B	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	93.2	Ca_IGHV1S45*01_VHH	46.2	H1	13	H1-13-*	-1	TAPGYTDSNYYMS	BBAAAAABBBBBB
B	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	93.2	Ca_IGHV1S45*01_VHH	50.0	H2	10	H2-10-1	15	GVNTGRGSTS	BBBAAALBBB
B	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	93.2	Ca_IGHV1S45*01_VHH	0.0	H3	20	H3-20-*	-1	AVAACHfcdslpKTQDEYIL
B	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	93.2	Ca_IGHV1S45*01_VHH	87.5	H4	8	H4-8-*	-1	QDNAKNTM	BBABAABB
C	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	93.2	Ca_IGHV1S45*01_VHH	46.2	H1	13	H1-13-*	-1	TAPGYTDSNYYMS	BBAAAAABBBBBB
C	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	93.2	Ca_IGHV1S45*01_VHH	50.0	H2	10	H2-10-1	11	GVNTGRGSTS	BBBAAALBBB
C	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	93.2	Ca_IGHV1S45*01_VHH	0.0	H3	20	H3-20-*	-1	AVAACHfcdslpKTQDEYIL
C	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	93.2	Ca_IGHV1S45*01_VHH	87.5	H4	8	H4-8-*	-1	QDNAKNTM	BBABAABB
D	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	93.2	Ca_IGHV1S45*01_VHH	46.2	H1	13	H1-13-*	-1	TAPGYTDSNYYMS	BBAAAAABBBBBB
D	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	93.2	Ca_IGHV1S45*01_VHH	50.0	H2	10	H2-10-1	15	GVNTGRGSTS	BBBAAALBBB
D	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	93.2	Ca_IGHV1S45*01_VHH	0.0	H3	20	H3-20-*	-1	AVAACHfcdslpKTQDEYIL
D	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	93.2	Ca_IGHV1S45*01_VHH	87.5	H4	8	H4-8-*	-1	QDNAKNTM	BBABAABB
E	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	93.2	Ca_IGHV1S45*01_VHH	46.2	H1	13	H1-13-*	-1	TAPGYTDSNYYMS	BBBLAAABBBBBB
E	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	93.2	Ca_IGHV1S45*01_VHH	50.0	H2	10	H2-10-1	16	GVNTGRGSTS	BBBAAALBBB
E	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	93.2	Ca_IGHV1S45*01_VHH	0.0	H3	20	H3-20-*	-1	AVAACHfcdslpKTQDEYIL
E	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	93.2	Ca_IGHV1S45*01_VHH	87.5	H4	8	H4-8-*	-1	QDNAKNTM	BBABAABB
F	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	93.2	Ca_IGHV1S45*01_VHH	46.2	H1	13	H1-13-*	-1	TAPGYTDSNYYMS	BBBLAAABBBBBB
F	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	93.2	Ca_IGHV1S45*01_VHH	50.0	H2	10	H2-10-1	10	GVNTGRGSTS	BBBAAALBBB
F	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	93.2	Ca_IGHV1S45*01_VHH	0.0	H3	20	H3-20-*	-1	AVAACHfcdslpKTQDEYIL
F	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	93.2	Ca_IGHV1S45*01_VHH	87.5	H4	8	H4-8-*	-1	QDNAKNTM	BBABAABB
G	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	91.8	Ca_IGHV1S45*01_VHH	46.2	H1	13	H1-13-*	-1	TAPGYTDSNYYMS	BBBLAAABBBBBB
G	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	91.8	Ca_IGHV1S45*01_VHH	50.0	H2	10	H2-10-*	-1	GVNTGRGSTS	BBBAABABBB
G	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	91.8	Ca_IGHV1S45*01_VHH	0.0	H3	20	H3-20-*	-1	AVAACHfcdslpKTQDEYIL
G	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	91.8	Ca_IGHV1S45*01_VHH	87.5	H4	8	H4-8-*	-1	QDNAKNTM	BBABAABB
H	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	93.2	Ca_IGHV1S45*01_VHH	46.2	H1	13	H1-13-*	-1	TAPGYTDSNYYMS	BBBLAABEBBBBB
H	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	93.2	Ca_IGHV1S45*01_VHH	50.0	H2	10	H2-10-1	10	GVNTGRGSTS	BBBAAALBBB
H	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	93.2	Ca_IGHV1S45*01_VHH	0.0	H3	20	H3-20-*	-1	AVAACHfcdslpKTQDEYIL
H	heavy	Camelus.dromedarius	Ca_IGHV1S45*01_VHH	93.2	Ca_IGHV1S45*01_VHH	87.5	H4	8	H4-8-*	-1	QDNAKNTM	BBABAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022