PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6XW6

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	89.0	Al_IGHV3-3*01_VHH	76.9	H1	13	H1-13-1	21	AASGRTISSSPMG	BBBLBBAAABBBB
C	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	89.0	Al_IGHV3-3*01_VHH	70.0	H2	10	H2-10-2	11	AISGNGGNTY	BBBAALABBB
C	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	89.0	Al_IGHV3-3*01_VHH	100.0	H3	21	H3-21-*	-1	AARSRfsamhlaYRRLVDYDD
C	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	89.0	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	12	RDNAKNTV	BBAAALBB
D	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	89.0	Al_IGHV3-3*01_VHH	76.9	H1	13	H1-13-1	20	AASGRTISSSPMG	BBBLBBAAABBBB
D	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	89.0	Al_IGHV3-3*01_VHH	70.0	H2	10	H2-10-2	7	AISGNGGNTY	BBBAALABBB
D	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	89.0	Al_IGHV3-3*01_VHH	100.0	H3	21	H3-21-*	-1	AARSRfsamhlaYRRLVDYDD
D	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	89.0	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	11	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022