PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6XVI

#CDRs = 4; #Clusters = 5.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Helicobacter.pylori.g27	Al_IGHV3-3*01_VHH	94.7	Al_IGHV3-3*01_VHH	84.6	H1	13	H1-13-*	-1	AASgrtfSTAAMG
A	heavy	Helicobacter.pylori.g27	Al_IGHV3-3*01_VHH	94.7	Al_IGHV3-3*01_VHH	60.0	H2	10	H2-10-1	13	GIYWTVGSTY	BBBAAALBBB
A	heavy	Helicobacter.pylori.g27	Al_IGHV3-3*01_VHH	94.7	Al_IGHV3-3*01_VHH	100.0	H3	19	H3-19-*	-1	AARRRGftlapTRANEYDY
A	heavy	Helicobacter.pylori.g27	Al_IGHV3-3*01_VHH	94.7	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	8	RDNAKNTV	BBAAALBB
B	heavy	Helicobacter.pylori.g27	Al_IGHV3-3*01_VHH	94.7	Al_IGHV3-3*01_VHH	84.6	H1	13	H1-13-*	-1	AASgrtFSTAAMG
B	heavy	Helicobacter.pylori.g27	Al_IGHV3-3*01_VHH	94.7	Al_IGHV3-3*01_VHH	60.0	H2	10	H2-10-1	13	GIYWTVGSTY	BBBAAALBBB
B	heavy	Helicobacter.pylori.g27	Al_IGHV3-3*01_VHH	94.7	Al_IGHV3-3*01_VHH	100.0	H3	19	H3-19-*	-1	AARRRGftlapTRANEYDY
B	heavy	Helicobacter.pylori.g27	Al_IGHV3-3*01_VHH	94.7	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	8	RDNAKNTV	BBAAALBB
C	heavy	Helicobacter.pylori.g27	Al_IGHV3-3*01_VHH	94.7	Al_IGHV3-3*01_VHH	84.6	H1	13	H1-13-*	-1	AASGRTfstAAMG
C	heavy	Helicobacter.pylori.g27	Al_IGHV3-3*01_VHH	94.7	Al_IGHV3-3*01_VHH	60.0	H2	10	H2-10-1	13	GIYWTVGSTY	BBBAAALBBB
C	heavy	Helicobacter.pylori.g27	Al_IGHV3-3*01_VHH	94.7	Al_IGHV3-3*01_VHH	100.0	H3	19	H3-19-*	-1	AARRRGftlapTRANEYDY
C	heavy	Helicobacter.pylori.g27	Al_IGHV3-3*01_VHH	94.7	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	8	RDNAKNTV	BBAAALBB
D	heavy	Helicobacter.pylori.g27	Al_IGHV3-3*01_VHH	94.7	Al_IGHV3-3*01_VHH	84.6	H1	13	H1-13-*	-1	AASgrtfsTAAMG
D	heavy	Helicobacter.pylori.g27	Al_IGHV3-3*01_VHH	94.7	Al_IGHV3-3*01_VHH	60.0	H2	10	H2-10-*	-1	GIYWTVGSTY	BBBAABABBB
D	heavy	Helicobacter.pylori.g27	Al_IGHV3-3*01_VHH	94.7	Al_IGHV3-3*01_VHH	100.0	H3	19	H3-19-*	-1	AARRRGftlapTRANEYDY
D	heavy	Helicobacter.pylori.g27	Al_IGHV3-3*01_VHH	94.7	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	8	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022